Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4392 ATGAAAACCTTCAAACCCCATCACTACCAATTATCAACCCTCATCTTCATCCTCCTCTTCTCCTTCCTTAAATCTCAAACACCAAGACAAGAAAACAACACAGGCTACACATGTCCTACCACCAACAACAACATAAACCAAACAAACACTTATCCATGTCAATCCTATGCTTACTACAAAGCCACACCACCAAATTACCTCGATTTAGCTACCATTTCAGACCTTTTCCAACTTAGTCGCTTAATGATCTCAAAACCAAGCAATATATCTTCACCTTCTTCTCCTTTACTCCCTAATCAACCCCTTCTCATTCCCTTAACATGTTCTTGCAACTTCATCAACACTACTTTTGGTTCAATCTCCTACTCCAATATCACCTACACCATCAAACCAAATGACACTTTTTTTCTTGTTTCAACCATAAACTTTCAAAACCTCACTAGATACCCTTCTGTTGAAGTTGTTAATCCAAATCTTGTAGTTACTAATCTTTCTATTGGTGCTAATGTTGTTTTTCCTATCTTTTGTAAATGTCCTGATAAAACCAGAACAAATTCAAGTTTCATGATTTCTTATGTTGTGCAACCTTTGGATAATGTTTCATCTATTGCGTCAATGTTTGGAACAAGTGAAAAGTCTATAGTTGATGTTAATGGTGAAAAGTTATATGATTATGATACTATTTTTGTTCCTGTTTCTAAATTACCTACTTTGAAACAACCTAGTATTGCTGTTTCTCCTTCTCCTCCACCAAGTGGAAATTTTGATGGTGGTGATGATCATGATAAGAGTGGAATTGTTAAAGGGTTGGCTATTGGATTAGGAATTTTAGGGTTGTTGTTGATTTTGGTTTTAGTGTTTTGGTTTTACAGAGAGGTTCTGTTTAAGAAGGAAAAGAAAGGGAGAGGTTTGTATTTTGGAGAGAAAGGGCAAAAAGGGGATTATGATAATAAGAAGAAGAAAATGGATGTGAATTTTATGGCTAATGTTTCTGATTGTTTGGATAAGTATAGAGTTTTTGGATTTGATGAATTGGTTGAAGCTACTGATGGGTTTGATGAAAGGTTTTTGATTCAAGGGTGTGTTTATAAAGGCGAAATTGATGGACAAGTTTATGCTATTAAGAAGATGAAATGGAATGCTTATGAAGAACTCAAAATCTTGCAGAAGGTAAACCATGGGAATTTGGTGAAGTTGGAAGGATTTTGCATAGAAGCAGAAGAATCAAATTGCTATCTAGTCTATGAATATGTTGAAAATGGATCTCTCTACTCATGGCTACATGAAGACAAAAACGAAAAGTTGAATTGGGTAACAAGGCTAAGAATAGCCATTGACATTTCAAATGGTTTATTATACATTCATGAACACACAAGACCAAAAGTTGTACACAAAGACATTAAAAGTAGCAACATTCTCTTGGACTCAAACATGAGAGCTAAAATTGCAAATTTTGGTCTTGCAAAGAGTGGAATTAATGCAATTACAATGCACATTGTAGGAACACAAGGGTACATTTCGCCCGAATATCTAGCTGATGGTATTGTCTCAACAAAGATGGATGTGTTTTCTTTTGGTGTTGTGTTGCTTGAATTGATTTCTGGGAAGGAAGTTATTGATGAGGAGGGAAATGTTTTGTGGGCTAGTGCTATGAAAACATTTGAAGTGAAGAATGAACAAGAAAGGGCTAGGAGACTTAAGGAATGGTTGGATAAGGCTATTCTAAAGGAAACATGTTCAATGGAAAGTTTGATGGGTGTACTACATGTTGCAATTGCTTGTTTGCATAGAGATCCATCAAAGAGGCCTAGCATTATAGATATTGTTTATTCACTTAGTAAATGTGAAGAGGCTGGGTTTGAGCTCTCAGATGATGGGCTTGGTTCACCAAGGTTGGTGGCTAGGTAA 1908 0.3585 MKTFKPHHYQLSTLIFILLFSFLKSQTPRQENNTGYTCPTTNNNINQTNTYPCQSYAYYKATPPNYLDLATISDLFQLSRLMISKPSNISSPSSPLLPNQPLLIPLTCSCNFINTTFGSISYSNITYTIKPNDTFFLVSTINFQNLTRYPSVEVVNPNLVVTNLSIGANVVFPIFCKCPDKTRTNSSFMISYVVQPLDNVSSIASMFGTSEKSIVDVNGEKLYDYDTIFVPVSKLPTLKQPSIAVSPSPPPSGNFDGGDDHDKSGIVKGLAIGLGILGLLLILVLVFWFYREVLFKKEKKGRGLYFGEKGQKGDYDNKKKKMDVNFMANVSDCLDKYRVFGFDELVEATDGFDERFLIQGCVYKGEIDGQVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIEAEESNCYLVYEYVENGSLYSWLHEDKNEKLNWVTRLRIAIDISNGLLYIHEHTRPKVVHKDIKSSNILLDSNMRAKIANFGLAKSGINAITMHIVGTQGYISPEYLADGIVSTKMDVFSFGVVLLELISGKEVIDEEGNVLWASAMKTFEVKNEQERARRLKEWLDKAILKETCSMESLMGVLHVAIACLHRDPSKRPSIIDIVYSLSKCEEAGFELSDDGLGSPRLVAR* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4392 635 SMART serkin_6 356 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4392 635 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 28 633 - -
Mal1g4392 635 ProSiteProfiles Protein kinase domain profile. 334 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4392 635 PANTHER - 28 633 - -
Mal1g4392 635 Gene3D Phosphorylase Kinase; domain 1 322 417 - -
Mal1g4392 635 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Mal1g4392 635 SMART LysM_2 126 173 IPR018392 -
Mal1g4392 635 SMART LysM_2 191 231 IPR018392 -
Mal1g4392 635 SUPERFAMILY Protein kinase-like (PK-like) 338 612 IPR011009 -
Mal1g4392 635 Gene3D Transferase(Phosphotransferase) domain 1 418 624 - -
Mal1g4392 635 Pfam LysM domain 192 230 IPR018392 -
Mal1g4392 635 Pfam Protein kinase domain 369 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4392 Mal-Chr1 101596586 101600141 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4392 9 614 Receptor kinase-like Gene Family AT2G23770 33.385 8.14e-84 273
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mal1g4392 Pkinase 1.6e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4392 - - lang:109352405 833.943