Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4359 ATGCCTTTGAGGCCAATGAAAGAGAGTTCAGAACAACACCTTGTGATCAAACCTATGAGTCAAGCTAAGAAGGTTACTAAAGCTGTTCAAAATGGTAAAGGTTCACCATTGTTGTCACAAGAACAACAAAACCAAACTTCACCACCTCAATCAAAGAGTGGTGGAAGAAGAAGGAGTAGAAATGGTAGAAAATCTGATCAAGTTGATGTTTTGATGAGACCAAGTTGTAGACCTTGTACTGTTGTGAAGAACAATGAAAATGGTGATGTTGTTGAAAATGGAAACATAATCTCTAGTGATGTAGAGATGAGTTATCCTACTTCAAGCAAGTCTTTGAGTTTTGCTCAAAGGCCAGGTTATGGACAAGTTGGTACAAAATGCATTGTCAAAGCCAACCACTTCTTTGCAGAATTACCAGACAAGGACTTGAACCAGTATGATGTGACTATTACACCGGAAGTGTCTTCGAAAGCCGTAAACAGGTCCATCATAGCAGAACTTGTGAGGCTGTATAAAGAGTCTGACCTTGGGATGAGGCTTCCAGCATATGATGGCAGAAAAAGTCTTTACACAGCAGGAGTTCTTCCCTTTTCCTGGAGAGAATTTAAGATTAAGCTTATCGAAGAAGAGGATGGAATTAATGGACCCAAAAGAGAAAGAGAGTACAAAGTGGTGATCAAGTTTGTTGCAAGGGCTAACTTGCATCACTTGGGACAGTTTCTTGCCGGAAAGCGTGCTGATGCTCCACAGGAGGCAATACAAATTCTCGACATAGTACTAAGAGAGCTAGCGTCGAAGAGGTTTTGTCCCATCGGGAGGTCATTTTATTCACCTGATATTAGAGCACCACAACGGCTTGGAGAAGGATTGGAGTCTTGGTGTGGATTTTACCAAAGCATAAGGCCTACTCAGATGGGCCTTTCCCTCAATATTGATATGGCTTCTGCTGCGTTCATTGAACCTCTTCCGGTGGTGGAATTTGTTGGCCAGCTATTAGGAAAAGATGTGCTGTCAAGGCAGTTGTCTGATGCGGATCGCATCAAGATTAAGAAATCTCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGGAGTGTTAGACGAAAGTATCGAGTTTCCGGTATAACTTCTCAACCAACAAGAGAACTTGTGTTTCCCGTTGATGAGAACTCGACTATGAAATCAGTGGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTAAACATACACACCTTCCTTGCCTTCAAGTTGGTGGAAATCAAAAGAAAGCAAACTATTTACCTATGGAGGCCTGCAAAATTGTTGAGGGGCAACGATATACTAAAAGGTTGAATGAAAAGCAAATTACTTCTCTCTTGAAAGTCACATGCCAGAGACCCCGTGATCGAGAAAATGACATTTTGCGGACAGTTCAGCATAACGCTTATGATCAAGATCCTTATGCAAAGGAATTTGGGATTAAAGTCAGCGAGAAGTTAGCTTCGGTGGAAGCACGGATTCTTCCAGCTCCTTGGCTTAAATATCACGAGAGTGGGAAAGAAAAAAATTGTTTACCCCAAGTTGGCCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACCGTTAGCCGCTGGGCGTGCATAAATTTTTCGCGAGGCGTGCAGGATAGCGTTGCTCGTACATTTTGTAACGAGCTTGCACAAATGTGTCAAGTATCTGGCATGGAATTTAATCTGGAGCCTGTTATCCCGATCTACAATGCAAAACCCGAGCAGGTGGAGAAAGCTTTGAAGCATGTTTACCATGTGTCGTCGAACAAAACCAAAGGAAAAGAGTTGGAGCTTTTGTTAGTAATATTGCCCGACAACAATGGCTCTCTCTATGGTGATCTCAAGCGTATTTGTGAGACTGACCTTGGCTTAATTTCTCAATGTTGTCTAACAAAGCATGTCTTTAAGATCACTAAGCAGTACTTGGCCAATGTGTCTCTGAAGATCAACGTTAAGATGGGTGGTAGAAACACTGTTCTTGTTGACGCTGTAAGCTGCAGAATACCATTGGTTAGTGACATACCGACAATAATATTTGGAGCAGATGTTACACACCCTGAAAATGGGGAAGACTCCAGCCCCTCAATAGCAGCTGTTGTAGCGTCCCAAGATTGGCCTGAAGTTACAAAGTATGCAGGTTTAGTTTGTGCTCAACCTCAAAGACAAGAACTTATACAAGATTTGTACAAAACATGGCACGATCCTGTTCGTGGTGTAGTTAGTGGTGGCATGATCCGAGATTTGTTGGTTTCATTTAGAAGGGCAACAGGACAGAAGCCACAAAGGATTATATTTTATAGGGATGGTGTAAGTGAAGGACAGTTTTACCAAGTTCTACTATACGAGTTGGATGCAATTCGGAAGGCATGTGCTTCTTTGGAGCCAAACTATCAACCTCCAGTAACTTTCATAGTTGTGCAAAAAAGACATCATACTCGGTTATTCGCAAACAACCACAGGGACAGGAACAGTACTGATAGGAGTGGAAATATACTGCCTGGAACTGTTGTTGATACCAAAATATGTCACCCAACCGAGTTTGATTTCTATCTCTGCAGTCACGCCGGCATCCAGGGAACAAGTCGTCCAGCGCATTATCATGTTCTATGGGATGAAAACAACTTCACAGCAGATGGAATTCAGTCTTTGACAAACAATCTTTGTTATACATATGCCAGGTGTACACGCTCCGTATCTGTTGTTCCTCCAGCATATTATGCACATTTAGCGGCTTTCCGAGCCCGTTTCTACACGGAACCAGACCTTCAGGAGACTGGCTCCACTGGTGGTCGTGGTTCCAAGACAACACGTGCAGCCGGAGATTGCGGTGTCAAGCCATTGCCAGCCTTGAAGGAAAATGTGAAGAGAGTAATGTTTTATTGTTAA 2925 0.4243 MPLRPMKESSEQHLVIKPMSQAKKVTKAVQNGKGSPLLSQEQQNQTSPPQSKSGGRRRSRNGRKSDQVDVLMRPSCRPCTVVKNNENGDVVENGNIISSDVEMSYPTSSKSLSFAQRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSKAVNRSIIAELVRLYKESDLGMRLPAYDGRKSLYTAGVLPFSWREFKIKLIEEEDGINGPKREREYKVVIKFVARANLHHLGQFLAGKRADAPQEAIQILDIVLRELASKRFCPIGRSFYSPDIRAPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRQLSDADRIKIKKSLRGVKVEVTHRGSVRRKYRVSGITSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIKHTHLPCLQVGGNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCQRPRDRENDILRTVQHNAYDQDPYAKEFGIKVSEKLASVEARILPAPWLKYHESGKEKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRGVQDSVARTFCNELAQMCQVSGMEFNLEPVIPIYNAKPEQVEKALKHVYHVSSNKTKGKELELLLVILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLVDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQPQRQELIQDLYKTWHDPVRGVVSGGMIRDLLVSFRRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFANNHRDRNSTDRSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYTEPDLQETGSTGGRGSKTTRAAGDCGVKPLPALKENVKRVMFYC* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4359 974 MobiDBLite consensus disorder prediction 24 55 - -
Mal1g4359 974 SMART Piwi_a_2 611 932 IPR003165 GO:0003676
Mal1g4359 974 SUPERFAMILY PAZ domain 316 477 IPR036085 GO:0005515
Mal1g4359 974 CDD Piwi_ago-like 481 931 IPR045246 -
Mal1g4359 974 Gene3D - 680 974 IPR036397 GO:0003676
Mal1g4359 974 PANTHER PROTEIN ARGONAUTE 10 53 973 - -
Mal1g4359 974 Pfam Mid domain of argonaute 520 597 IPR032473 -
Mal1g4359 974 MobiDBLite consensus disorder prediction 1 70 - -
Mal1g4359 974 Gene3D paz domain 315 441 - -
Mal1g4359 974 Pfam Piwi domain 612 930 IPR003165 GO:0003676
Mal1g4359 974 ProSiteProfiles Piwi domain profile. 611 932 IPR003165 GO:0003676
Mal1g4359 974 CDD PAZ_argonaute_like 321 436 - -
Mal1g4359 974 ProSiteProfiles PAZ domain profile. 322 437 IPR003100 GO:0005515
Mal1g4359 974 SUPERFAMILY Ribonuclease H-like 603 932 IPR012337 -
Mal1g4359 974 SMART PAZ_2_a_3 326 459 IPR003100 GO:0005515
Mal1g4359 974 Pfam PAZ domain 345 453 IPR003100 GO:0005515
Mal1g4359 974 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 53 973 - -
Mal1g4359 974 SMART DUF1785_2 269 321 IPR014811 -
Mal1g4359 974 Pfam Argonaute linker 1 domain 270 319 IPR014811 -
Mal1g4359 974 Gene3D - 501 674 - -
Mal1g4359 974 Pfam Argonaute linker 2 domain 463 509 IPR032472 -
Mal1g4359 974 Pfam N-terminal domain of argonaute 126 260 IPR032474 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4359 Mal-Chr1 100316711 100323571 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4359 1 974 Eukaryotic Initiation Factors Gene Family AT5G43810 81.937 0.0 1655
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4359 K11593 - gmx:100816999 1748.41