Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4347 ATGCATGTTTGGACAGTGATGGGAAAAACAAGCAAATGGCTTAGGAATCTTTTGAAAGGGAAGAAAGACAAAGAAAAAGAGAAGGAAAATGGAACAGAAAATCCAACTACTCCAATCTCAACAACACCAAAGGAGAAAAGAAGATGGAGTTTCAGAAGATCATCAGCTTCAAAGGAGTTGAATGTTGCAGAATCAAGTGTCACTTCTTCAGTGACAGTGCAAACTGTTATAGATTCTCAGAATGATCATAGGAAGCATGTCATGGAAGTTGCTGCTGCTGATGGTGTGATCTTCTTGAATTCTTGTTCCAATGTAGGAAATAGAAGGAGTATTCAAGAGGCTTCTGCCATTAAAATTCAATCTGTCTTTAGATCCTACTTGGCAAGAAAGGCACTGTGTGCTCTTAGAGGAATAGTGAAGCTGCAAGCACTAATAAGGGGTCACTTGGTGAGAAAACAAGCAAATGAGACATTAAGATGCATGCAGGCTTTGGTCATAGCACAAGCAAGAGCTTGTGCTCAAAGGGCTAGAATGTTGTCAGAAGAAAAGACTAATCAAAAGCTATCACCCTACAGAAAAACCACTGAGGACAATTTATTCATGCATATGTATAATGAAATGGACAGAGGCTTGGAAGAGAATATAAAAACGGTGGAGATGGATGTTTGTGAATCCAAAGGTGACTCAAGAGGCAGAAACAATACTACAAATCATGAACTGTCTGAACATAGATTTTCTGCATATTATTCACCAAATGGTTCATACTCAAAGAAAGAAAACTACAAAGTATCACCTACACCATCAGCACTAACAGATTCAAGTCCAAGAGCATGCAGTGGACATTTTGAGGATTGTTCCTTCAGTACAGCACAGAACAGTCCCTATTACTATTCAGCAGTTTCAAGAGTAGATGATTCAAAGCTTCCTTTTGCTTTCACTAGACAATCCTATGAAGAATCCATGACCAATGACTATCCATTATTTCCAAATTACATGGCTAACACAGAATCATCAAGAGCTAAAGTCAGATCACAAAGTGCACCGAAGCAAAGGCCGGACACATACGAGAGACAACCGAGTCGGCGAAGAGCTTCTGTGGAAGGAAGAAATGTTCCAAGGCCAGTGAGGATGATGAGATCATCTTCACAGGTTGGTGCCACAGCACAAAACTACCAATATCCATGGTCAATAAAGCTTGATAGGTCCTCAGTTTCACTCAATGAAAGTGAGGGTTGTGGCTCTACAAGTACAGTACTAACAAACTCTAACTACTGCAGATCTCTTGTTTCATATAGTCCTCATGGAGCAAGGTACTGA 1317 0.4002 MHVWTVMGKTSKWLRNLLKGKKDKEKEKENGTENPTTPISTTPKEKRRWSFRRSSASKELNVAESSVTSSVTVQTVIDSQNDHRKHVMEVAAADGVIFLNSCSNVGNRRSIQEASAIKIQSVFRSYLARKALCALRGIVKLQALIRGHLVRKQANETLRCMQALVIAQARACAQRARMLSEEKTNQKLSPYRKTTEDNLFMHMYNEMDRGLEENIKTVEMDVCESKGDSRGRNNTTNHELSEHRFSAYYSPNGSYSKKENYKVSPTPSALTDSSPRACSGHFEDCSFSTAQNSPYYYSAVSRVDDSKLPFAFTRQSYEESMTNDYPLFPNYMANTESSRAKVRSQSAPKQRPDTYERQPSRRRASVEGRNVPRPVRMMRSSSQVGATAQNYQYPWSIKLDRSSVSLNESEGCGSTSTVLTNSNYCRSLVSYSPHGARY* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4347 438 Pfam Protein of unknown function (DUF4005) 313 370 IPR025064 -
Mal1g4347 438 SMART iq_5 134 155 IPR000048 GO:0005515
Mal1g4347 438 SMART iq_5 111 133 IPR000048 GO:0005515
Mal1g4347 438 PANTHER IQ-DOMAIN 5-RELATED 7 414 - -
Mal1g4347 438 ProSiteProfiles IQ motif profile. 136 163 IPR000048 GO:0005515
Mal1g4347 438 MobiDBLite consensus disorder prediction 336 353 - -
Mal1g4347 438 ProSiteProfiles IQ motif profile. 112 140 IPR000048 GO:0005515
Mal1g4347 438 Pfam IQ calmodulin-binding motif 114 132 IPR000048 GO:0005515
Mal1g4347 438 Pfam IQ calmodulin-binding motif 136 153 IPR000048 GO:0005515
Mal1g4347 438 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 7 414 - -
Mal1g4347 438 MobiDBLite consensus disorder prediction 18 48 - -
Mal1g4347 438 MobiDBLite consensus disorder prediction 336 383 - -
Mal1g4347 438 Gene3D - 111 165 - -
Mal1g4347 438 MobiDBLite consensus disorder prediction 18 32 - -
Mal1g4347 438 MobiDBLite consensus disorder prediction 354 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4347 Mal-Chr1 99900010 99902790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4347 6 433 IQD Protein Family AT4G14750 46.171 3.62e-99 302
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4347 - - gmx:100817667 558.91