Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4346 ATGGCAAAAACAAAAGAAGGAACAAGTTCTGAGATGTCTTTGAAAGATCAAGGTAACGAGTTTTTCAAAACAGGAAAATATCTCAAAGCTGCTGCACTCTACACTCAAGCTATCAAAAAAGACCCTTCAAATCCCACACTTTTTAGTAATCGTGCTGCAGCATTGCTGCAATTGGATAAGCTTAACAAAGCTCTTGATGATGCTGAAATGACAATTAAATTAAAACCCGAATGGGAAAAGGGACATTTCCGGAAGGGATGCATACTGGAGGCCATGAAACGATACGATGATGCTTTAGCTTCCTTTCAGATAGCTTCGCAGTATAACCCACAAAGTCAAGAAGTATTGAAAAAGATAAAGAGGATAAACCAACTAGTGAAAGATAGCAAACGAGCTCAAGAAGTGGAGAATATGAGATCGAATGTTGACATGGCCAAACATTTAGATATACTGAAACCTGAAATGTCTGAAAAGTATGGATCGGAAGAATGCTGGAAAGACATGTACTCGTTCCTTGTCGAGACCATGGAGACTGCTGTAAAATCATGGCATGAAACTTCTTCAGTGGATGCTAGAGTTTACTTTCTTCCTGATAAGGAAAAGACGCAGACCGACAAGTATCCCCCAATTGTGAATATTGATAAGGCCTTTGAGTCACCACAAACACACAGCAGCTGCTTTCCATTTCTTAGGCAGTATGCCGAGGAGTCTTTCTCAAGAGCAGCCTGCTTAGTGGCTGCCAAAAACATCATTGCTTATCCACAGGTCTGGAAAGGCCAAGGATCAAGGAAATGGAAACATGCACAGAATGATGGTTTCTTCGTTCAATTTGAGTCTCCTTCCATGCGAAAATTGTGGTTTATTCCCAGTTCTAATGAAAAGGGACAGATACTATGCAGGGATCCAGAAGTTTTGGACATTGGTGCTCATGAAGTTGTTCCTCGCTTGTTCAAAGAAAAGACCTCCCAATCTTAA 975 0.4072 MAKTKEGTSSEMSLKDQGNEFFKTGKYLKAAALYTQAIKKDPSNPTLFSNRAAALLQLDKLNKALDDAEMTIKLKPEWEKGHFRKGCILEAMKRYDDALASFQIASQYNPQSQEVLKKIKRINQLVKDSKRAQEVENMRSNVDMAKHLDILKPEMSEKYGSEECWKDMYSFLVETMETAVKSWHETSSVDARVYFLPDKEKTQTDKYPPIVNIDKAFESPQTHSSCFPFLRQYAEESFSRAACLVAAKNIIAYPQVWKGQGSRKWKHAQNDGFFVQFESPSMRKLWFIPSSNEKGQILCRDPEVLDIGAHEVVPRLFKEKTSQS* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4346 324 PANTHER STRESS-INDUCED-PHOSPHOPROTEIN 1 13 320 - -
Mal1g4346 324 SMART tpr_5 79 112 IPR019734 GO:0005515
Mal1g4346 324 SMART tpr_5 11 44 IPR019734 GO:0005515
Mal1g4346 324 SMART tpr_5 45 78 IPR019734 GO:0005515
Mal1g4346 324 Pfam TPR repeat 18 58 - -
Mal1g4346 324 SUPERFAMILY TPR-like 13 122 IPR011990 GO:0005515
Mal1g4346 324 Coils Coil 51 71 - -
Mal1g4346 324 Gene3D Tetratricopeptide repeat domain 3 163 IPR011990 GO:0005515
Mal1g4346 324 PANTHER TPR REPEAT CONTAINING PROTEIN 13 320 IPR045248 GO:0006457|GO:0030544|GO:0051879
Mal1g4346 324 ProSiteProfiles TPR repeat profile. 11 44 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4346 7 105 U-box Gene Family AT3G07370 29.703 2.78e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4346 - - gmx:100790717 579.711