Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4343 ATGGGAATGAGAGATTTTCACTTCAAGGTTAAGGCACTTAAGGTGAAACTCTCATGTTTAGGAAATAGAAACATAAGAAGAAACCATGGAGTTGGAAGCAAGCCATCATGGATGATGCCAATATCACATGGTCATCATGTGGTGGAGCATGATTGGATTAAAGATTGTGTTACCAAATATTTGCAAGCCAATTATTTTGACAAGAATCTCAAAGAGTCTCATTTGAGGAGAAAAGCCAAAGAAACACTCAAGAGAGCATACCTAGGTGCAAAAACAAAGATCAGAGAGACACACAAATCAGATGAAACATGCATCATGGGTTCAACATCTGTGATGATCATAAATGGAGAAAAACTCGTGCTAGCCAACATTGGAGATTACAGAACTGTTTTATGTAGAGATGGTGTAGCTTATCAGACAATTGGAAAATACAATAGATCATCCAAGAAACATTGGTATCACAGACTTTTTTCAGGTAATGCAACAGGTACAAAGCATTCTAAAGCTTCAGAACTTGTGGTTGGAGGTTATTGGATTGACTCTAGTACTGAATTTGTGATCTTGGCAAGCAATGGCATATGGGAGGTGATGAAGAACCAAGAAGCAGTGAATCTTATCAGGCACATAGAGGATCCACAAGAAGCAGCTGAGTGTTTGGCTAAGGAAGCATTGGTTAGGATGAGCAGAAGCAACATTTCATGTTTAATCATTAGATTTGATTGA 723 0.3817 MGMRDFHFKVKALKVKLSCLGNRNIRRNHGVGSKPSWMMPISHGHHVVEHDWIKDCVTKYLQANYFDKNLKESHLRRKAKETLKRAYLGAKTKIRETHKSDETCIMGSTSVMIINGEKLVLANIGDYRTVLCRDGVAYQTIGKYNRSSKKHWYHRLFSGNATGTKHSKASELVVGGYWIDSSTEFVILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLAKEALVRMSRSNISCLIIRFD* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4343 240 CDD PP2Cc 43 239 IPR001932 -
Mal1g4343 240 Pfam Protein phosphatase 2C 66 149 IPR001932 -
Mal1g4343 240 Pfam Protein phosphatase 2C 179 232 IPR001932 -
Mal1g4343 240 ProSiteProfiles PPM-type phosphatase domain profile. 28 239 IPR001932 -
Mal1g4343 240 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 44-RELATED 6 54 - -
Mal1g4343 240 PANTHER PROTEIN PHOSPHATASE 2C-LIKE PROTEIN 44-RELATED 54 239 - -
Mal1g4343 240 PANTHER ALPHABET, ISOFORM E-RELATED 6 54 - -
Mal1g4343 240 SUPERFAMILY PP2C-like 56 240 IPR036457 -
Mal1g4343 240 Gene3D - 41 240 IPR036457 -
Mal1g4343 240 SMART PP2C_4 26 237 IPR001932 -
Mal1g4343 240 PANTHER ALPHABET, ISOFORM E-RELATED 54 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4343 Mal-Chr1 99835503 99838118 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4343 1 239 PP2C-type Phosphatase Gene Family AT3G23360 38.768 4.80e-58 183
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4343 K19704 - gmx:100794054 344.354