Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4306 ATGGAACTTACAATTACACCTCCCATTTTAAAACATTACTTTGCACACCACCAAAATCATCTCATTCATCTCATTACACAGAATCACGTGGAGGCTATCATGGATGTTGATGAAATTCTTAAAATTTTCAAAGTACCACAGCAAGGTGAAGGTCAATATGATGGGAATGAATCAGAGGGTAATAGTTCTTTATCAGATAGTATGACTTGTTCTTCTGAAGAAGATTTTGATGTTGAAGACGGTAACATTGAGGGTACCGGATGCAATTTTGAATCTGAAACAGCTGTGGACTCGGTTGCTGATTTAGAGGAAATTAACTTCAAAAAAATGAGTATTGAGAGAGTAATGAGGTATCATTTTCCAAATCGCGATGTTGCATTTATGTTCTATAACTGGTATAGTTGTTTTCATGGATTTGCTCCTAGAAAGAGTAGAGTTATTAGGAACATTAAAGGTGAAGTGGTCCAACAAACATTTATTTGTCATCGGGAAGGCATTAGGGAGGAGAAATACATTAATTTGACATCTCGTAAAAGAGAACACAAACCATTGAGTAGGTGTGGATGCTTGGCAAATATAGTAGTTCACATTGATATTGGTAGCCAACGTTGGTACATTAAATTTTTGGATGATGACCATAACCATTCCCTTGTTAAAGAAAAGTTTGAGAGGATGCTTCCTGCACATAGAAAGATGAGTGAGTACGACAAATACCAAATGAGCACAATGAGGAAAGCGGGAATTACAACGACACGAATTTATGGTTTCTTTGCGTCTCAGGCTGGTGGATATGAGAATGCTGGGTACTCTAGAAGAGACATGTATAATGAACAATTCAAGAGAAGAGGGTCTAGGAATTCTGATGCTGAAGGAGCTCTAGATTTCCTGAAGGGTATGTGCTCAAGGGATGATATGATGTTTTGGAGGCACACAGTTAATGCGGATGGAACACTCCAACATTTGTTTTGGTGTGATGGTGTAAGTCGCATGGACTACTCGGTTTTTGGTGATGTGTTGGCCTTTGATGCGACATATAGGAAAATTAAATACAACACACCGTTAGTCATATTTTCTGGAGTAAACCATCATAATCAGAGCATTATTTTTGGTAGTGCAATTGTGGGTGACGAAACTGAAGACACATATGTTTGGCTTTTGGAGACTTTTGTTGAAGCGATGGGAGGGAAGTGCCCGGTTTCAGTTATAACTGACGGAGATTTAGCGATGAGAAATGCAATTAAAAGAATTTTTCCTAAAGCTCATCATCGTCTTTGCGCTTGGCATCTGATACGAAATGCCAATAGTAACATTAAAAACCCTCAATTTGTTTCCAGGTTTAAAAATTGCATGTTGGGTGATGTTGATGTTGATGTGTTTGAGCGTAAGTGGGATGATCTAGTTACTGAGTTTGGATTGGAAGAAAACCTCTGGATGTTGGAGATGTATGAGAAGCGGACTATGTGGGCAACTGCTCATATTCGTGGTAATTTTTTTGCAGGGTTCAGAACGACTTCTCGATGTGAAGGTTTGCATTCTGAATTTGGAAAATATGTCTCAGTTCTTACAAACTTGAGAGACTTTTTACAACAATTTTTTCGCTGGTTGAATTATCTAAGATATAGAGAGATAGAGGCTGATTTTTCATCTTCTTTTGGTGATGTTGTCCTTCAGACTCAACACACGCTACTAGAAAGATCAGCTTCTAAGTTGTACACTAGGGCAATATTTAGGATGGTTCGAACCATGTTGGAAAGAGCTTGTCGTTGCAAGGTAGAAAGCGTATCACAAAGTGGTTCAGTTTTTGACTACACTGTCTATAGATATCCTAGACAAGATATTGAATGGGTTGTTTCATTTTGTCAAGAAAGACTCTACTTTGAATGTACCTGCAAGAGACTTGAGACATTAGGCATTGCTTGTGATCATGTGATGTCTGTTTTGATTTACTTGAACATTGTAAACTTGCCTGATTGTCTCGTGCTACATAGGTGGACCAAATCTGTTAAGGATGTGATTAACGCCTCAAATGCAAATAGTTCAAGTCATAGGAACCCTGCATTCATAACATCATATGTTACATTTGTAGAGAGATGTAAGAGAATGGTTAATGCAGCTTTTGAATGTGGTAAGCCAGACTTTTTGCGTAGTTCAATTGAAATGGTTGAGAAACAGACAGAATTGTTGGAAGCACTTGGTAGAGGTGAAGATGTATCGTCTGTTATGGGTGTAGTAACAGAAGGTTCACTAGGGAATCCACCACGGGTGAGGCGAAAGGGGGGCGCTGGTGCTTCATCATCTGTGTTAGAATCTGGTAAATCAAAGCGGAGAGCAAATAAGTGTGGAAACTGTGGTATTGTGGGTCACAACCGCCAATCGTGTCAAGTTCGAAGCGAAGCACGTCGTCAATCAGAACAGCTTTACATGGAATCATTTATTTATGGTGAAGAATATGTTGATGAAGAAGAAGATTGTTGCAACATTGACATGGTATACTCCAAACATATTGAAACATTGGATTTGTCTAGTAGAGGCAAGTCTTATGTGTATATATTGAGTGAGATGAGAAGTTTTTGCCTTTGTACTAGTAAAAATTAA 2595 0.385 MELTITPPILKHYFAHHQNHLIHLITQNHVEAIMDVDEILKIFKVPQQGEGQYDGNESEGNSSLSDSMTCSSEEDFDVEDGNIEGTGCNFESETAVDSVADLEEINFKKMSIERVMRYHFPNRDVAFMFYNWYSCFHGFAPRKSRVIRNIKGEVVQQTFICHREGIREEKYINLTSRKREHKPLSRCGCLANIVVHIDIGSQRWYIKFLDDDHNHSLVKEKFERMLPAHRKMSEYDKYQMSTMRKAGITTTRIYGFFASQAGGYENAGYSRRDMYNEQFKRRGSRNSDAEGALDFLKGMCSRDDMMFWRHTVNADGTLQHLFWCDGVSRMDYSVFGDVLAFDATYRKIKYNTPLVIFSGVNHHNQSIIFGSAIVGDETEDTYVWLLETFVEAMGGKCPVSVITDGDLAMRNAIKRIFPKAHHRLCAWHLIRNANSNIKNPQFVSRFKNCMLGDVDVDVFERKWDDLVTEFGLEENLWMLEMYEKRTMWATAHIRGNFFAGFRTTSRCEGLHSEFGKYVSVLTNLRDFLQQFFRWLNYLRYREIEADFSSSFGDVVLQTQHTLLERSASKLYTRAIFRMVRTMLERACRCKVESVSQSGSVFDYTVYRYPRQDIEWVVSFCQERLYFECTCKRLETLGIACDHVMSVLIYLNIVNLPDCLVLHRWTKSVKDVINASNANSSSHRNPAFITSYVTFVERCKRMVNAAFECGKPDFLRSSIEMVEKQTELLEALGRGEDVSSVMGVVTEGSLGNPPRVRRKGGAGASSSVLESGKSKRRANKCGNCGIVGHNRQSCQVRSEARRQSEQLYMESFIYGEEYVDEEEDCCNIDMVYSKHIETLDLSSRGKSYVYILSEMRSFCLCTSKN* 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4306 864 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 115 682 IPR031052 GO:0006355
Mal1g4306 864 MobiDBLite consensus disorder prediction 51 71 - -
Mal1g4306 864 MobiDBLite consensus disorder prediction 50 72 - -
Mal1g4306 864 Pfam FAR1 DNA-binding domain 129 218 IPR004330 -
Mal1g4306 864 ProSiteProfiles Zinc finger SWIM-type profile. 613 651 IPR007527 GO:0008270
Mal1g4306 864 PANTHER OS02G0262500 PROTEIN 115 682 - -
Mal1g4306 864 MobiDBLite consensus disorder prediction 748 777 - -
Mal1g4306 864 Pfam MULE transposase domain 338 432 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4306 Mal-Chr1 98727816 98735392 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g4306 MULE 1.5e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4306 - - adu:110280242 624.009