Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4297 ATGGGTGCTCCGAAGCAGAAATGGACCGCAGACGAAGAGACAGCTCTAAAAGCGGGAGTAGCCAAATACGGAGCTGGAAAATGGTGTACCATACTTAAAGATCCGGAATTTAACACCACTTTGCGCAATCGTTCAAATGTAGACCTCAAGGACAAGTGGAGGAACTTAATGACGATAATATCGGGGTCAAGACAGAAGAAAGCAAATGTTGCACCTAAAAGGAATCCACCTCCTCCAAAACCTGAAAATAATCAACCAGAATCTGGTGGAATACCAAGATTGGACGAGGTTGCAACATTTTCAACAAAAATATCTGAGGAAAGAGTAAAAGATTCTCCTAAGGCAACTGAGAAAAATGGTCATGACATTGTCTGTACAAAATCACAAATTGATATGGAAATTTTTGAAATGATAAAGGGTCTCACCGTTCAAAAGGCGGCAGAAGTAGCTGCAAAAGCAGTTGAGGAAGCAAAAGTTGCCATTGTTGAGGCTGAGGAAGCAACTAAGGAGGCAGAGGTTGCTGAAGCCAAAGCAAAGGATGCACAATTGTTTGCAAAAGCAGAAAAGAAGGCACTAAAATTTCTCAAGATTTAA 594 0.4125 MGAPKQKWTADEETALKAGVAKYGAGKWCTILKDPEFNTTLRNRSNVDLKDKWRNLMTIISGSRQKKANVAPKRNPPPPKPENNQPESGGIPRLDEVATFSTKISEERVKDSPKATEKNGHDIVCTKSQIDMEIFEMIKGLTVQKAAEVAAKAVEEAKVAIVEAEEATKEAEVAEAKAKDAQLFAKAEKKALKFLKI* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4297 197 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Mal1g4297 197 Coils Coil 147 184 - -
Mal1g4297 197 Gene3D - 8 83 - -
Mal1g4297 197 PANTHER TELOMERE REPEAT-BINDING FACTOR 2 1 86 - -
Mal1g4297 197 PANTHER TELOMERE REPEAT-BINDING FACTOR 2 100 194 - -
Mal1g4297 197 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Mal1g4297 197 PANTHER SINGLE MYB HISTONE 4 100 194 IPR044597 GO:0003691
Mal1g4297 197 PANTHER SINGLE MYB HISTONE 4 1 86 IPR044597 GO:0003691
Mal1g4297 197 CDD SANT_TRF 6 57 - -
Mal1g4297 197 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Mal1g4297 197 MobiDBLite consensus disorder prediction 60 95 - -
Mal1g4297 197 SUPERFAMILY Homeodomain-like 2 58 IPR009057 -
Mal1g4297 197 SMART sant 4 59 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4297 Mal-Chr1 98473593 98474186 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4297 1 85 Single Myb Histone (SMH) Gene Family AT5G67580 63.953 7.85e-29 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Mal1g4297 Myb_DNA-binding 3.3e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4297 K09422 - sspl:121775370 109.768