Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4285 ATGGATCTTGTTATTGGTGGAAAATTTAAACTTGGGAGGAAAATTGGAAGTGGGTCGTTTGGAGAGATTTATTTGGGTGTTAATGTACAAACTCAAGAGGAAGTGGCTGTTAAGTTGGAACCTGTGAAGACAAAGCATCCTCAACTTCTCTATGAGTCCAAATTGTATATGCTTCTTCAAGGAGGAACCGGAATACCTCATATAAAGTGGTCTGGAGTCGAGGGTGACTACAATGTCATGGCTATTGACCTTCTTGGACCAAGCCTCGAAGATTTGTTTAACTATTGCAGTAGAAAATTCTCTTTGAAAACAGTGTTGATGCTTGCTGATCAACTAATAAACAGAGTAGAGTATATGCACTCTCGGGGTTTTCTGCATCGTGATATAAAGCCCGACAACTTTCTGATGGGTTTAGGCCGCAAGGCAAATCAGGTATACATTATTGACTATGGCCTTGCGAAAAAGTATCGTGATCTTCAGACACATAGGCATATACCATATAGGGAAAACAAGAATCTCACTGGAACTGCTCGATATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGATGATCTAGAATCACTTGGTTATGTACTAATGTACTTTTTGAGAGGAAGTCTTCCATGGCAAGGCATGAAAGCTGGCACTAAAAAGCAGAAATATGACAAGATAAGTGAAAAGAAGATGCTTACTCCAATAGAGGTATTGTGCAAGTCACATCCAACAGAATTCACATCATATTTCCACTATTGCCGATCATTGCGGTTTGAAGATAAACCCGATTATTCATATCTTAAGAGACTCTTCCGGGACCTATTCATTCGAGAAGGTTATCAGTTTGATTATGTATTTGATTGGACTATATTGAAGTATCCACAAATTGGATCCAGTTCTAGAACACGGCCAAGCGTGAAACCAGTCTTAAACCCAGCACCATCTGGAGAGCGATTAGAACGGCCTTCAGTTGGACAAGAGATTCGAGATAGATTATCAGGTGCAGTGGGGGCATTTTCAAGAAGGAATGGCTCTGGGCAAGGACTACAGCATAGGTCTTTAGATAATATGCCGTCTTCCAAAGATGTGCAACCTGATTCTGACAGGGCTCGCAGTTCTACTCGTAATGGTAGTGCTTCAAAAAGGCCTATGATATCAAGCAGCAGACCAAGCTCTTCTGGGGAACCTAGTGAAAACCGGTCTAGTCGATTGGTCTCGAGCAGTAGTCGTCTATCGACTACTCAGAGGGTTCAACCAGGTCTTGAATCCAAATCATCCTTCACCCGTACTGCAGGGACACGAGGTGGTCGCGATGATACTCTAAGGAGCTTTGAGCTCCTTTCAATTGGTACAGGGAAAAGGAAATGA 1374 0.4214 MDLVIGGKFKLGRKIGSGSFGEIYLGVNVQTQEEVAVKLEPVKTKHPQLLYESKLYMLLQGGTGIPHIKWSGVEGDYNVMAIDLLGPSLEDLFNYCSRKFSLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHRHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGMKAGTKKQKYDKISEKKMLTPIEVLCKSHPTEFTSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRTRPSVKPVLNPAPSGERLERPSVGQEIRDRLSGAVGAFSRRNGSGQGLQHRSLDNMPSSKDVQPDSDRARSSTRNGSASKRPMISSSRPSSSGEPSENRSSRLVSSSSRLSTTQRVQPGLESKSSFTRTAGTRGGRDDTLRSFELLSIGTGKRK* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4285 457 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4285 457 Pfam Protein kinase domain 10 229 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4285 457 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Mal1g4285 457 MobiDBLite consensus disorder prediction 345 363 - -
Mal1g4285 457 PANTHER CASEIN KINASE-RELATED 1 444 - -
Mal1g4285 457 SMART serkin_6 9 430 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4285 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mal1g4285 457 Gene3D Transferase(Phosphotransferase) domain 1 1 320 - -
Mal1g4285 457 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Mal1g4285 457 MobiDBLite consensus disorder prediction 372 435 - -
Mal1g4285 457 PANTHER CASEIN KINASE I-LIKE PROTEIN 1 444 - -
Mal1g4285 457 MobiDBLite consensus disorder prediction 300 457 - -
Mal1g4285 457 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4285 Mal-Chr1 97488805 97494628 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4285 8 213 MAP Kinase Kinase Kinase AT3G06030 26.852 1.23e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Mal1g4285 Pkinase 2.4e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4285 K08960 - jre:108991207 778.474