Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4281 ATGGAAACTACAAGGCGCTGGTTTAGTAGGTACAGGTCAAAAAAGAAGGAAGCTACAAATGCGTTGAACGTAATAAATGAAGAACCACCTTCGAGTGAAACCAAGCAGAAGGTTGACGCTGCAAAGCATTATGTAGAAAATTATTATAAGAACCAGAAGCAGAGCCAGCAGGAGAGGAAAGAAAGACGTAACATGCTAGAAAAGAAATTGGCTGATGTCGAAGTATCCAAGGAAGACAAGAACAATTTGCTTAAGCATTTTGAGGAAAAGGAGACAGAAATCATGCGCCGTCAGAGACTTAAGATGGGGTCTGACGACTTTGAGCCCCTGACTATGATTGGGAAGGGTGCATTTGGAGAGGTTAGAATCTGTCGAGAGAAGGCAACTGGCCAGGTATATGCTATGAAGAAGCTTAAGAAATCAGAGATGCTTCGTAGAGGACAGGTCGAACATGTCAAAGCTGAGAGGAACCTTCTTGCAGAAGTTGATAGCAATTGCATTGTAAAACTTTATTGTTCCTTTCAAGATGACGAGTATTTATATCTCATAATGGAGTATCTACCTGGTGGAGATATGATGACTTTGCTGATGCGGAAAGATATACTGACTGAAGATGAAGCTAGGTTCTATATTGGGGAGACTGTGCTAGCCATAGAGTCCATTCATAAACATAATTATATTCATAGAGACATCAAGCCTGACAACTTGCTGCTGGATAGGAGTGGTCACATGAAATTATCAGATTTTGGATTATGTAAGCCGCTAGACTGCAGTAATCTTCAGGAAAAAGACTTGTCTGTTGGAATTAACAGAAGTGGAGTTCTTCAAAGTGACGGACGTCCTTTAGCTCCTAAACGATCACAACAGCAGCAACTGGAGCATTGGCAGAAAAATCGCAGCAGAATGCTGGCCTATTCTACGGTTGGAACACCTGATTATATTGCTCCAGAAGTTCTGTTGAAGAGAGGATATGGCGTGGAATGTGATTGGTGGTCTCTAGGAGCTATAATGTATGAAATGCTTGTGGGGTACCCACCATTTTATTCAGACGAACCAATGGCAACTTGTCGAAAGATAGTAAATTGGAAAACTTATTTAAAATTTCCAGAAGAAGCCACACTATCACCCGAGGCAAAGGATCTTATTTGTCGTCTCCTATGTAATGCGGAGCAGAGGCTTGGAACTAAAGGAGCTGATGAAATAAAGGCTCACGCATGGTTCAAAGGTGTTGAATGGGACAAATTGTACCAAATGAAAGCTGCTTTTATTCCTGAGGTCAATGATGAATTGGATACTCAAAATTTTGATAATTTTGAAGAGGAGGACCAGCAAACTGAACCTGCCTCAAAGGCAGGGCTGTGGAGAAAGATGCTTCCATCTAAAGATATTAACTTTGTTGGTTACACATACAAGAAATTTGAAATGGTGGATGAAAATGTAATACCTGGATTTGCTGAACTGAAGAAGACAAAACCTAAAAGGCCATCTATTAAGTCCTTATTTGAGGGTGAATCATCTAAGGCTTCTTCTCATCAACCTGCTAGAGGGAGAAAAATGAATCACAATGATCCAAATTAA 1578 0.4056 METTRRWFSRYRSKKKEATNALNVINEEPPSSETKQKVDAAKHYVENYYKNQKQSQQERKERRNMLEKKLADVEVSKEDKNNLLKHFEEKETEIMRRQRLKMGSDDFEPLTMIGKGAFGEVRICREKATGQVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDDEYLYLIMEYLPGGDMMTLLMRKDILTEDEARFYIGETVLAIESIHKHNYIHRDIKPDNLLLDRSGHMKLSDFGLCKPLDCSNLQEKDLSVGINRSGVLQSDGRPLAPKRSQQQQLEHWQKNRSRMLAYSTVGTPDYIAPEVLLKRGYGVECDWWSLGAIMYEMLVGYPPFYSDEPMATCRKIVNWKTYLKFPEEATLSPEAKDLICRLLCNAEQRLGTKGADEIKAHAWFKGVEWDKLYQMKAAFIPEVNDELDTQNFDNFEEEDQQTEPASKAGLWRKMLPSKDINFVGYTYKKFEMVDENVIPGFAELKKTKPKRPSIKSLFEGESSKASSHQPARGRKMNHNDPN* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4281 525 SUPERFAMILY Protein kinase-like (PK-like) 83 448 IPR011009 -
Mal1g4281 525 PANTHER SERINE/THREONINE-PROTEIN KINASE 29 508 - -
Mal1g4281 525 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 29 508 - -
Mal1g4281 525 ProSitePatterns Protein kinases ATP-binding region signature. 113 136 IPR017441 GO:0005524
Mal1g4281 525 ProSiteProfiles Protein kinase domain profile. 107 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4281 525 Pfam Protein kinase C terminal domain 426 470 IPR017892 GO:0004674|GO:0005524|GO:0006468
Mal1g4281 525 MobiDBLite consensus disorder prediction 488 525 - -
Mal1g4281 525 Pfam Protein kinase domain 109 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4281 525 SMART pkinase_C_6 408 472 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal1g4281 525 Coils Coil 70 90 - -
Mal1g4281 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Mal1g4281 525 CDD STKc_NDR_like 105 471 - -
Mal1g4281 525 ProSiteProfiles AGC-kinase C-terminal domain profile. 408 480 IPR000961 GO:0004674|GO:0005524|GO:0006468
Mal1g4281 525 SMART serkin_6 107 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4281 525 Gene3D Transferase(Phosphotransferase) domain 1 191 269 - -
Mal1g4281 525 Gene3D Transferase(Phosphotransferase) domain 1 304 427 - -
Mal1g4281 525 Gene3D Phosphorylase Kinase; domain 1 71 190 - -
Mal1g4281 525 Gene3D Phosphorylase Kinase; domain 1 428 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4281 Mal-Chr1 97351404 97410566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4281 27 512 AGC Kinase Gene Family AT3G23310 81.263 0.0 827
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Mal1g4281 Pkinase 3.6e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4281 K08790 - gmx:100795087 883.248