Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4213 ATGGCTGTCGACGGCAACACCAATGTATGCCTCCATCTTTTACTCGGTTCCCCCTCCTGTACACCAACCTGCTGCTGCGATGAGATGCCAATCGCAAAGAAACACAAACGTGAGAACCAAGAAACCAAGAAGTGCAATAATGTTGATGATGAATGGGAGATCAAGAAGGTTCTTGAACCGAGTGATATCTCTAGCAATTTGAGTAGGCTTCTGCTGAACAGAGAAATTGCTAACCAATTTGTGATTCCGGTGTTGTTGGGTGGTGCTGAAGCTGCTCAAACAAAAGGAGTTGAAGTTAAACTATGGGATATTCAAACTCAATCTTCCCATTCTCTTGTTTTTAAGATATGGACTTCAGCGCAAAGCCATGTCTTCACTAAAAGATGGATCAAGGAATTTGTTCTACGAAGGAAATTGAAGAAAGGAGATAAAATTGGTCTACATTGGGATCAAGAAAACAAATGGTTTAATTTCTCGGTTCTTCAGAGGTCTTAG 495 0.4121 MAVDGNTNVCLHLLLGSPSCTPTCCCDEMPIAKKHKRENQETKKCNNVDDEWEIKKVLEPSDISSNLSRLLLNREIANQFVIPVLLGGAEAAQTKGVEVKLWDIQTQSSHSLVFKIWTSAQSHVFTKRWIKEFVLRRKLKKGDKIGLHWDQENKWFNFSVLQRS* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4213 164 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 34 163 - -
Mal1g4213 164 CDD B3_DNA 52 161 IPR003340 GO:0003677
Mal1g4213 164 Gene3D - 44 162 IPR015300 -
Mal1g4213 164 PANTHER TRANSCRIPTION FACTOR B3-DOMAIN FAMILY-RELATED 34 163 - -
Mal1g4213 164 SUPERFAMILY DNA-binding pseudobarrel domain 50 160 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4213 Mal-Chr1 95053889 95054383 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4213 54 145 B3 DNA Binding Superfamily AT1G25560 32.632 1.78e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4213 - - mtr:MTR_1g046880 206.838