Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4202 ATGGAGTTTTCTTCTGCAAAATGGGCTTTCAATGTTTGTTTCTTGTTGTTACTTTTTGTGCTGATTGTTGAAGATGAAGCCATGGCTTCATCACAGATCTCTCAGCTTAGCAATGTTGAAACTGAGACACATAGGTTACCAAGCTTTAACGATTCATCAATGGCGGCAAGGGAAAAAGAAGCTGAGAAATTGAATGAGCGCGCTGCTGTTGCTAATCCAAAAGAGGTGGCTTCTATGGTTGAGATGCACATCCAGAACAGCACTGAAAGAAGGAATCTTGGATTTTTCTCTTGTGGAACTGGTAACCCTATTGACGATTGTTGGCGTTGTGACCGCAATTGGCAACAAAACAGGAAGCGCCTAGCAGACTGTGGTATTGGTTTCGGTAGAAATGCCATTGGTGGTCGCGACGGAAAGTACTATGTTGTCACTGACCCAAGAGATGATGACCCTGTTAACCCAAGGCCAGGAACTTTGCGCCACGCCGTGATCCAAGATAGGCCACTTTGGATTGTGTTCAAGAGAGACATGGTTATTCAGTTCAAGCAAGAGCTTATTGTGAACAGTTTCAAGACCATTGATGGAAGAGGAGCTAATGTACACATTGCTAATGGAGGGTGCATTACTATTCAGTATGTTACTAATGTTATCATTCATGGTCTTCATATTCATGATTGTAAACCAACTGGTAATGCTATGGTGAGAAGCTCAGAAACACATTTTGGTTGGAGGACTATGGCTGATGGTGATGCTGTTTCTATATTTGGTTCAAGTCACATTTGGGTTGATCATAATTCTTTGTCTCATTGTGCTGATGGTCTTGTTGATGCTGTCATGGGCTCAACAGCTATAACAATTTCTAACAACCACTTCACCCACCACAATGAGGTGATTCTGTTGGGACACAGTGACTCCTACACAAGAGACAAGCAGATGCAAGTGACCATAGCATATAACCATTTTGGAGAGGGTCTTATTCAGAGAATGCCACGGTGTAGACATGGTTATTTCCATGTGGTGAACAATGACTATACTCACTGGGAGATGTATGCTATTGGTGGAAGTGCTAACCCCACAATCAACAGCCAGGGTAACAGATACAATGCTCCTACTAACCCTTTTGCCAAAGAGGTAACTAAGAGAGTGGAAACAGCTGAAACTCAGTGGAAAGGTTGGAATTGGAGATCAGAGGGAGACTTATATCTAAATGGTGCTTATTTCACAGCATCTGGTGCTGGAGCTTCAGCTAGCTATGCAAGAGCCTCAAGCTTAGGAGCAAAATCTTCAGCTATGGTTGGAACCATGACTTCAAATGCTGGTGCACTAGGCTGCAAAAGAGGCCGTCAGTGCTAA 1353 0.4324 MEFSSAKWAFNVCFLLLLFVLIVEDEAMASSQISQLSNVETETHRLPSFNDSSMAAREKEAEKLNERAAVANPKEVASMVEMHIQNSTERRNLGFFSCGTGNPIDDCWRCDRNWQQNRKRLADCGIGFGRNAIGGRDGKYYVVTDPRDDDPVNPRPGTLRHAVIQDRPLWIVFKRDMVIQFKQELIVNSFKTIDGRGANVHIANGGCITIQYVTNVIIHGLHIHDCKPTGNAMVRSSETHFGWRTMADGDAVSIFGSSHIWVDHNSLSHCADGLVDAVMGSTAITISNNHFTHHNEVILLGHSDSYTRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSANPTINSQGNRYNAPTNPFAKEVTKRVETAETQWKGWNWRSEGDLYLNGAYFTASGAGASASYARASSLGAKSSAMVGTMTSNAGALGCKRGRQC* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4202 450 Pfam Pectate lyase 182 365 IPR002022 -
Mal1g4202 450 Gene3D - 101 443 IPR012334 -
Mal1g4202 450 PRINTS Pollen allergen Amb family signature 328 347 IPR018082 -
Mal1g4202 450 PRINTS Pollen allergen Amb family signature 184 200 IPR018082 -
Mal1g4202 450 PRINTS Pollen allergen Amb family signature 421 444 IPR018082 -
Mal1g4202 450 PRINTS Pollen allergen Amb family signature 248 269 IPR018082 -
Mal1g4202 450 PRINTS Pollen allergen Amb family signature 148 173 IPR018082 -
Mal1g4202 450 PRINTS Pollen allergen Amb family signature 392 416 IPR018082 -
Mal1g4202 450 PRINTS Pollen allergen Amb family signature 124 141 IPR018082 -
Mal1g4202 450 PRINTS Pollen allergen Amb family signature 350 369 IPR018082 -
Mal1g4202 450 PANTHER PECTATE LYASE 18-RELATED 15 447 IPR045032 GO:0030570
Mal1g4202 450 SUPERFAMILY Pectin lyase-like 78 444 IPR011050 -
Mal1g4202 450 PANTHER PECTATE LYASE 15 447 - -
Mal1g4202 450 SMART amb_all 176 373 IPR002022 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4202 Mal-Chr1 94212298 94217123 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4202 31 450 Polysaccharide Lyase AT4G13710 78.118 0.0 708
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4202 K01728 - gmx:100808253 799.66