Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4180 ATGTCTAGTAACATCAGGGAGGGCAGAGTTTTGGCAAAAGGGCATTATGTTATTTTATTGCTATTGACTTTATTCCTTTCTAGCACAGAGGGGTTGAATTTAGAGGGACAAGTCCTCTTGGAGATTAAGAATGACTTTCATGATAAAGATAATTATTTGGCAAATTGGAAGTCTAGTGATGAAAATCCATGTGGATGGATAGGTGTAAATTGCACTTATGAATATAAAAGTGGAAATCCAGTGGTTAGTTCTCTTAATTTGAGTTCTATGAATCTTTCTGGAACCCTAAATGCTAGAATTGGAGGTCTTACAAATTTAACTTATCTCAATCTTGCTTACAATGGTTTGAATGGAAATATCCCTAAGGAGATTGGTGAGTGTTTGAGTTTGGAATATCTTTACTTGAATAATAATCAATTTGAGGGACCAATTCCTGTTGAATTAGGGAAACTTTCAGTTTTGAGATATTTGAATATTTGCAACAATGAGCTCTCTGGCGTTCTTCCGGACGAGATTGGAAATTTGACTTCATTGCTTGAGTTGGTTGCTTTTAGCAACTTTCTCGTTGGCCCTTTGCCGAGTTCCATTGGAAATCTTAACAATCTTGTGACTTTCAGAGCCGGGGCGAATAACATTACCGGTAGCTTGCCGAATGAGATTGGCAGATGTAAGAACTTAGAACGTCTTGGTCTTGCTCAAAATCAGATAGTTGGTGAGATACCAAGCGAGATTGGGATGCTTGAAAACTTAAAAGATTTGGTTTTATGGGAAAATGAGTTGTCAGGAGTTGTTCCTAAAGAGCTTGGGAATTGTAGCAAGCTTGAGATCCTTGCTTTATATGGGAATAATCTCGTTGGACCGTTACCTGGCGAGATTGGGAACCTGAAATCGTTGAAGTGGTTGTATCTTTATAGAAATGATTTGAATGGATCCATTCCAAGGGAAATTGGAAATCTTTCTTCAGCTTTACACATTGATTTGTCGGAGAACTCTTTAGGAGGCGATATCCCTTCGGAGTTCGGCAAACTTCGTGGTCTAAGTTTGCTCTTTCTCTTTGAGAACCATCTAACTGGTGTTATACCGAAGGAGTTTGGTAATTTGAAGAACCTGACGAAGCTGGACCTATCGATAAATAATCTTACGGGTCAGATTCCGCACGGCTTCCAATATTTGACTAATATGAATCAGTTGCAACTTTTTGACAACTCCTTAAGTGGTATTATTCCTCAGGGACTTGGACTTTATAGTCGTCTTTGGGTAGTTGATTTTTCTGACAACAACTTGACAGGAACAATACCTCCTTATCTATGCCGAAACTCTCATTTGATGCTGTTGAATGTAGCAGATAATCAGCTTTACGGAAACATACCGACAGGGATATTGAACTGTCAATCATTGGCACAGTTGCTGTTGGTCGGTAACAGGCTTACTGGTGGCTTCCCTTCCGAATTGTGTAAACTTGAGAACCTTACTGCCATTGATTTGAATGATAACAGGTTTAGTGGTCCACTTCCTCTTGAGATCGTAAACTGCCGCAATTTGCAAAGGCTTCATATTGCAAACAATTACTTCACATTGGAGTTGCCTAAGGAAATAGGAAATCTATCTCAATTGGTAACTTTTAATGTTTCATCAAACCTTTTCACCGGAAGAATCCCAACCGAAATTGTTTGGTGCCAGAGGCTGCAGCGGCTAGATCTCAGCCGGAATCATTTTACTGGTTCTTTGCCGAATGAACTCGGAACACTTCAGCACTTGGAGATTCTCAAGCTCTCAAACAATAAGTTGTCTGGAAATATTCCTGCAGCATTAGGCAATCTGTCTCATTTGAACTGGTTGCTGATGGATGGCAATTTGTTTTACGGAGAAATACCTCCTCAGTTAGGATCTCTTTCGAGCTTACAGATAGCAATGGATCTCAGTTACAATAATCTTTCTGGAAGAATACCGTCTCGGCTTGGCAATCTCAATATGCTTGAGTATCTCTTTCTCAATAACAACCTTTTGGATGGTGAAATTCCGAGTACCTTTAGCGCGCTTTCTAGCTTGATGGGGTGTAATTTCTCATACAATAACCTCTCTGGACCAATTCCTTCCACTAAAATTTTCGAAAGTATGGCTGTTAGCAGCTTTGTTGGTGGTAACACAGGCCTTTGCGGTACACCTCTCGGTGACTGCAATAAAATTTCAGGTACTCACTCTACTCATCCGGTGAAAAGTGCTGATTTTGCCCGTGCCAAAATTGTCATGATCATTGCAGCTACTGTTGGTGGTGTTTCTCTCATTTTGATTTTAGTGATTCTATATTTAATGAAACGACCTCGGGAGGCTGTTGATTCCTTTGCAGACACTGAAACTCCATCATTGGATTCAGATATCTATTTGCCTCCAAAGGAAGGTTTCACATTTCAAGAACTACTTGAAGCTACAAAAAGATTTCATGAAAGTTATGTTATCGGTAGCGGAGCATGTGGCACAGTTTATAAGGCAGTGATGAAATCTGGTAAGACGATTGCTGTTAAGAAGTTAGCGTCAAACCGGGAAGGGAACAACGTCGATAATAGTTTCAGGGCTGAAATATCGACTCTAGGAAGGATAAGGCATCGGAATATAGTGAAGCTGTATGGTTTTTGCTATCACCAAGGTTCAAATCTCCTACTTTATGAGTACATGGAAAGAGGTAGCTTAGGTGAATTATTGCATGGTTCTGCAAGTAATTTGGAGTGGCCGACTCGATTCATGATCGCTCTTGGAGCTGCTGAAGGTCTTTCTTACTTGCATCATGACTGTAAACCGAAGATTATTCACCGTGACATAAAATCTAACAACATTCTGCTTGATGAAAACTTTGAGGCCCATGTTGGTGATTTTGGATTGGCTAAAGTGATTGACATGCCTCAGTCCAAATCGATGTCCGCAGTTGCTGGATCTTATGGGTATATTGCTCCTGAATATGCATATACCATGAAGGTTACAGAGAAGTGCGACATATATAGCTACGGCGTTGTACTCTTGGAATTGCTAACCGGAAAAACTCCGGTTCAGCCAATGGAGCAAGGAGGAGATCTTGTCACATGGACGAGAAACCATATTCGGAACTGTAACAATACACTGAGCTCAGAGATACTCGACACTCGGCTTGATCTTGATGACCAAATCACCATAAATCACATGCTCACTGTTCTGAAACTTGCTTTAATGTGCACAAGTATGACTCCTGCTAAGAGGCCATCAATGCGCGAGGTTGTGTTGATGCTCATCGAGTCAAATGAACGAGAAGGAAATTTAACACTCACTCAAACAAACCATGATCCTCCTTCCAAAGATAGCACATGA 3336 0.4047 MSSNIREGRVLAKGHYVILLLLTLFLSSTEGLNLEGQVLLEIKNDFHDKDNYLANWKSSDENPCGWIGVNCTYEYKSGNPVVSSLNLSSMNLSGTLNARIGGLTNLTYLNLAYNGLNGNIPKEIGECLSLEYLYLNNNQFEGPIPVELGKLSVLRYLNICNNELSGVLPDEIGNLTSLLELVAFSNFLVGPLPSSIGNLNNLVTFRAGANNITGSLPNEIGRCKNLERLGLAQNQIVGEIPSEIGMLENLKDLVLWENELSGVVPKELGNCSKLEILALYGNNLVGPLPGEIGNLKSLKWLYLYRNDLNGSIPREIGNLSSALHIDLSENSLGGDIPSEFGKLRGLSLLFLFENHLTGVIPKEFGNLKNLTKLDLSINNLTGQIPHGFQYLTNMNQLQLFDNSLSGIIPQGLGLYSRLWVVDFSDNNLTGTIPPYLCRNSHLMLLNVADNQLYGNIPTGILNCQSLAQLLLVGNRLTGGFPSELCKLENLTAIDLNDNRFSGPLPLEIVNCRNLQRLHIANNYFTLELPKEIGNLSQLVTFNVSSNLFTGRIPTEIVWCQRLQRLDLSRNHFTGSLPNELGTLQHLEILKLSNNKLSGNIPAALGNLSHLNWLLMDGNLFYGEIPPQLGSLSSLQIAMDLSYNNLSGRIPSRLGNLNMLEYLFLNNNLLDGEIPSTFSALSSLMGCNFSYNNLSGPIPSTKIFESMAVSSFVGGNTGLCGTPLGDCNKISGTHSTHPVKSADFARAKIVMIIAATVGGVSLILILVILYLMKRPREAVDSFADTETPSLDSDIYLPPKEGFTFQELLEATKRFHESYVIGSGACGTVYKAVMKSGKTIAVKKLASNREGNNVDNSFRAEISTLGRIRHRNIVKLYGFCYHQGSNLLLYEYMERGSLGELLHGSASNLEWPTRFMIALGAAEGLSYLHHDCKPKIIHRDIKSNNILLDENFEAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGKTPVQPMEQGGDLVTWTRNHIRNCNNTLSSEILDTRLDLDDQITINHMLTVLKLALMCTSMTPAKRPSMREVVLMLIESNEREGNLTLTQTNHDPPSKDST* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4180 1111 ProSiteProfiles Protein kinase domain profile. 813 1087 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4180 1111 Gene3D Ribonuclease Inhibitor 437 506 IPR032675 -
Mal1g4180 1111 Gene3D Ribonuclease Inhibitor 387 436 IPR032675 -
Mal1g4180 1111 Gene3D Transferase(Phosphotransferase) domain 1 891 1104 - -
Mal1g4180 1111 Pfam Leucine rich repeat 350 404 IPR001611 GO:0005515
Mal1g4180 1111 Pfam Leucine rich repeat 561 619 IPR001611 GO:0005515
Mal1g4180 1111 Pfam Leucine rich repeat 249 308 IPR001611 GO:0005515
Mal1g4180 1111 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 4 1097 - -
Mal1g4180 1111 SMART serkin_6 813 1086 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4180 1111 SUPERFAMILY L domain-like 51 404 - -
Mal1g4180 1111 Gene3D Ribonuclease Inhibitor 288 386 IPR032675 -
Mal1g4180 1111 Gene3D Ribonuclease Inhibitor 185 287 IPR032675 -
Mal1g4180 1111 Pfam Leucine rich repeat N-terminal domain 33 71 IPR013210 -
Mal1g4180 1111 Gene3D Ribonuclease Inhibitor 507 600 IPR032675 -
Mal1g4180 1111 Gene3D Ribonuclease Inhibitor 601 727 IPR032675 -
Mal1g4180 1111 Gene3D Ribonuclease Inhibitor 31 184 IPR032675 -
Mal1g4180 1111 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 1097 - -
Mal1g4180 1111 Pfam Protein kinase domain 814 1083 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g4180 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 934 946 IPR008271 GO:0004672|GO:0006468
Mal1g4180 1111 SUPERFAMILY L domain-like 284 676 - -
Mal1g4180 1111 SUPERFAMILY Protein kinase-like (PK-like) 790 1086 IPR011009 -
Mal1g4180 1111 SMART LRR_typ_2 367 390 IPR003591 -
Mal1g4180 1111 SMART LRR_typ_2 487 511 IPR003591 -
Mal1g4180 1111 SMART LRR_typ_2 295 319 IPR003591 -
Mal1g4180 1111 SMART LRR_typ_2 656 679 IPR003591 -
Mal1g4180 1111 SMART LRR_typ_2 343 366 IPR003591 -
Mal1g4180 1111 SMART LRR_typ_2 583 607 IPR003591 -
Mal1g4180 1111 SMART LRR_typ_2 151 175 IPR003591 -
Mal1g4180 1111 SMART LRR_typ_2 247 270 IPR003591 -
Mal1g4180 1111 SMART LRR_typ_2 103 127 IPR003591 -
Mal1g4180 1111 Gene3D Phosphorylase Kinase; domain 1 781 890 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4180 Mal-Chr1 93424084 93427857 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4180 35 1088 Receptor kinase-like Gene Family AT5G56040 37.921 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mal1g4180 Pkinase 1.5e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4180 - - gmx:100805792 1759.96