Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4174 ATGGAGGATTTCGATATCATGGATATGGACATGGACATGGACATGGACATGGACGTTCCTCTCCCCGAAGAACTCGAATTACTCGAATCAACCTACCGCATCTACGAACAACAACCCAATAACAACCACTACTACGAACCTCCCGAAGACGAAACCGAACCGCCGCAAGATCTCGCTTCTCCTCCCGAACCTCAATCCAACAGCCACAAACGTCCTCGATCTAGTTCAAATTCGAATTCAGATTCAGTTTTGGATTCAGATTCTTCCGATGTTGAAAAAAGAGAGAAAGTTAGGGTTAGGGTTGCGGAAGATGCTCAGGTAGAAGAGGATTGGCTTCGATACTCTCCTCCGCCTACTGAAGTTACTGTTGAAGAAGTGAGATTCTCTAAGGAGAAGACGTTATCGCGATTTGCATCGGAGATTGATGGTGAAGTTATGCCGGTTACTGCGCCTAATGGAGATAGGGTTTATACGAAGCTGGATAGGTATTACGGTGAAGATCGTGTTACGAAGCTGAATTGTAGAGGAGATTCTTCTGATCTTGCTATAGAACCTATTAGTGTTCTGTTAGAAAGGTTGGAGCAAGAGACTTTTGCTAAGACCTTGGAAGCTAGTTCTGAAAGCCAAAGTGTTGTAGATGATGTTCCTGAAACACTAAGGGTCCATGAAAAACTTTGGGTAGATAAATATGCTCCAAAGTCGTTTACGGATCTTCTTAGTGATGAACAGACAAATCGCGAGGTACTTTTGTGGTTAAAACAATGGGATTCTACTGTGTTTGGATCTGAAATTCGAAGTACATCAGACGACGTTTTGTCTGCTTTGAAACGGCATTCATCTATATCCCACAAACCGAAACCTCTAGGTTCTAATTTTCCAAGATCAAATGGAGGGCACAATTGGAGTAGTAATAACAGGTATACAAATTCTAGAAGTACGGATGAGAGTGCTAATTCAAAGAGTATTCACGATATACACAATACGAAGTCACGGAATATTGGTGCACCAGAACAAAAGATCCTTCTGCTATGTGGACCACCAGGTCTTGGTAAAACAACACTTGCACATGTAGCTGCTAAGCATTGTGGATATCATGTGGTGGAGGTTAATGCTAGTGATGATCGTTCTACATCAACAATTGAAGCAAAAATCCTAGATGTGGTTCAGATGAACTCTGTCTTGTCAGATTCAAAGCCAAAGTGTCTGGTGGTGGATGAAATTGATGGAGCCCTTGGTGATGGAAAGGGTGCTGTGGAGGTTCTTCTAAAGATGATTTCTGCTGAAAGGAAGCCTGATGCAGGGAAGCAAAGTTTGGATAAAGGACAAATGGAAAGGAAATCATCAAAGAAGGGGCGGAAAACGGCTTCCCTGTCAAGACCTGTGATTTGCATATGTAATGACCTATATGCACCTGCCTTAAGATCATTACGTCAAGTGGCCAAGGTTCATATATTTGTTCAACCAACAGTTAGTCGGGTGGTAAACAGACTAAAATATATATGTAACAAGGAGGGGGTGAAAGCCAATGCCATTGCACTCGCTGCTTTAGCGGATTATACAGCATGTGATATACGATCATGCTTGAACACTCTCCAATTTCTCTCTAAGAAGAAAGAAACCCTCAATGCGTTTGATATTGGTTCGCAAGTTGTTGGTCAGAAGGACATGTCAAAAAATGTTCTCGACATCTGGAAAGAGTTGTTCCAAAGAAAAAGAACAAAAAAGATGGAAAGAAAATCTCATAATAGCAAGTTCTCTGAATTTGACACCTTGTACTCCCTTATATCATACCGTGGTGATAGTGACCTGATTCTGGATGGAATTCATGAAAATATTCTGCAACTCAATTATCATGATCCAGTTATGCAGAAAACTGTCAAGTGCCTCAACAGTCTTGAAGTTTATGATCTGTTGCATCAATATATAATGCGCACACAACAAATGCCTCTCCTTGTTCATTTGCCTCCCATTGCAATTATTGTACATCATACAGTAGCTCAAGTTCAGAAGCCAAACATTGAGTGGCCAAAGTCATATCACAGGTATCGAACGACAATGATGGAAAAGATGGACATTTTGAATACGTGGCACCACAAAATATCGCCACATATTGCAAGACACTTATCACCTACTTCCTTTGTTGAAGACTTAATTTCTCCATTGTTGGATATTCTGTCCCCACGATCCATAAGACCGGTGGCATTACAACTACTATCGGATAAGGAGAAGAATGATCTTGCTCAATTAGTTAGCACAATGGTCTCATATGCTATCACATATAAGAAAATGAAATCAGATGCACTGCCTAATACCCTGAAGAATGATGTAGCAGATGAATTGTCTCTGTCTCTTGTTCCTTCTCTCGGTAACTTTATAAGCTTTAAGGATTATACTTCAAACCATTACGTGCTTTCTTTAGCTATGAGGCAGGTTTTGGTGCATGAAGTTGAAAAGCATAAAATTTTACAAGCTAATGTCAAAACTGCGACTTTAGCAAATGGAGGGCATGAAGTTATTGAGGCTGGAAACAACAACATTCCATTTGCCAATACCAAGAATCATGCTGCCATAGTTGATATGAAAACCATTGAAAGTCAGGCTAATGTTTTAGCAAGGAAATCAAATGAATATCCCAAGATAGTTTCATTAAACTTGAATCCCACTAAAGTTGCAAAAGCAACAGACAATGCGAAACTGCCAGACATGGGAAATAAGAAAAAACCATCTAGGAGTTCCTTAAATTTCTTTGACAGGTTTAAAAAGTCAACTGTCAAGGGTCTCCAAAATGATGACAGATCTGTACAGAAAGAAACTACATCAGAGAAAGATCGAAGCCCTTTACTCTTTAAATTTAATGAGGGTTTTACGAATGCAGTCAAAAGGCCCGTTCGAATTCGTGAATTTCTGTCCTAG 2913 0.402 MEDFDIMDMDMDMDMDMDVPLPEELELLESTYRIYEQQPNNNHYYEPPEDETEPPQDLASPPEPQSNSHKRPRSSSNSNSDSVLDSDSSDVEKREKVRVRVAEDAQVEEDWLRYSPPPTEVTVEEVRFSKEKTLSRFASEIDGEVMPVTAPNGDRVYTKLDRYYGEDRVTKLNCRGDSSDLAIEPISVLLERLEQETFAKTLEASSESQSVVDDVPETLRVHEKLWVDKYAPKSFTDLLSDEQTNREVLLWLKQWDSTVFGSEIRSTSDDVLSALKRHSSISHKPKPLGSNFPRSNGGHNWSSNNRYTNSRSTDESANSKSIHDIHNTKSRNIGAPEQKILLLCGPPGLGKTTLAHVAAKHCGYHVVEVNASDDRSTSTIEAKILDVVQMNSVLSDSKPKCLVVDEIDGALGDGKGAVEVLLKMISAERKPDAGKQSLDKGQMERKSSKKGRKTASLSRPVICICNDLYAPALRSLRQVAKVHIFVQPTVSRVVNRLKYICNKEGVKANAIALAALADYTACDIRSCLNTLQFLSKKKETLNAFDIGSQVVGQKDMSKNVLDIWKELFQRKRTKKMERKSHNSKFSEFDTLYSLISYRGDSDLILDGIHENILQLNYHDPVMQKTVKCLNSLEVYDLLHQYIMRTQQMPLLVHLPPIAIIVHHTVAQVQKPNIEWPKSYHRYRTTMMEKMDILNTWHHKISPHIARHLSPTSFVEDLISPLLDILSPRSIRPVALQLLSDKEKNDLAQLVSTMVSYAITYKKMKSDALPNTLKNDVADELSLSLVPSLGNFISFKDYTSNHYVLSLAMRQVLVHEVEKHKILQANVKTATLANGGHEVIEAGNNNIPFANTKNHAAIVDMKTIESQANVLARKSNEYPKIVSLNLNPTKVAKATDNAKLPDMGNKKKPSRSSLNFFDRFKKSTVKGLQNDDRSVQKETTSEKDRSPLLFKFNEGFTNAVKRPVRIREFLS* 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4174 970 Gene3D - 488 558 - -
Mal1g4174 970 Pfam ATPase family associated with various cellular activities (AAA) 341 467 IPR003959 GO:0005524|GO:0016887
Mal1g4174 970 MobiDBLite consensus disorder prediction 62 85 - -
Mal1g4174 970 MobiDBLite consensus disorder prediction 293 316 - -
Mal1g4174 970 MobiDBLite consensus disorder prediction 1 23 - -
Mal1g4174 970 MobiDBLite consensus disorder prediction 432 453 - -
Mal1g4174 970 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 224 542 IPR027417 -
Mal1g4174 970 MobiDBLite consensus disorder prediction 281 330 - -
Mal1g4174 970 Gene3D - 223 486 IPR027417 -
Mal1g4174 970 CDD AAA 336 430 - -
Mal1g4174 970 CDD HLD_clamp_RFC 488 546 - -
Mal1g4174 970 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 15 969 - -
Mal1g4174 970 MobiDBLite consensus disorder prediction 432 451 - -
Mal1g4174 970 MobiDBLite consensus disorder prediction 1 98 - -
Mal1g4174 970 SMART AAA_5 337 491 IPR003593 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4174 335 535 Core DNA Replication Machinery Family AT5G22010 31.944 1.35e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4174 K11269 - gmx:100785041 1330.47