Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4104 ATGGAGACAAATTCTGAAGAGGTTCATGTATTGGCTGTTGATGATAGTCTTGTTGATCGAAAATTCATTGAAAGGTTGCTCAAAATTTCAGCTTGTAAAGTTACTGCTGTGGATAGTGGAATCAGAGCACTGCAATTTTTAGGGTTGGATGAGCAGAGAGAGATTTCTGGATCAGATGGGTTTGTCCCTTTGAAGGTGGATCTAGTCATTACAGATTATTGCATGCCAGAAATGACTGGTTATGAGTTGCTCAAAAAAATCAAGGAATCATCCACTTTTAAAGAAATTCCCGTAGTGATTATGTCTTCTGAAAATATTTTGCCACGCATAGACAGGTGCAAAGGATTTTATAATAAAGCCAGTAAAGTTATGCGACATGAAACGTTTGAAGGGTTACATGATGTCGAGGGAGACAGCAAATCGAAGCTAGAAGAAGTATGTAATATGTCATCATCACCGTCCATTTCATCATCTCCTTTGTCTGCACCTGGCATGCTTGATTCTCCAATCAGACGGTTTAAAATGACTGACATTGAATGA 540 0.3852 METNSEEVHVLAVDDSLVDRKFIERLLKISACKVTAVDSGIRALQFLGLDEQREISGSDGFVPLKVDLVITDYCMPEMTGYELLKKIKESSTFKEIPVVIMSSENILPRIDRCKGFYNKASKVMRHETFEGLHDVEGDSKSKLEEVCNMSSSPSISSSPLSAPGMLDSPIRRFKMTDIE* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4104 179 Gene3D - 8 115 - -
Mal1g4104 179 Pfam Response regulator receiver domain 10 108 IPR001789 GO:0000160
Mal1g4104 179 ProSiteProfiles Response regulatory domain profile. 9 140 IPR001789 GO:0000160
Mal1g4104 179 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 3 113 - -
Mal1g4104 179 SUPERFAMILY CheY-like 8 113 IPR011006 -
Mal1g4104 179 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 113 IPR045279 GO:0009736
Mal1g4104 179 SMART REC_2 8 132 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4104 Mal-Chr1 89866311 89867535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4104 8 113 Response Regulator Gene Family AT3G48100 75.472 3.14e-52 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Mal1g4104 Response_reg 1.7e-13 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4104 K14492 - gmx:100779833 197.978