Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4080 ATGGCCAATGACTTTAGTAACATGAAGCAAGGTGTGCCATACTCGGTCGCATGCAGGTTTTGCAACCGAGTGTTCATGAGCAATGAAGCATTCATAACTCACATGGAGTCTCACATGGAGAATGAGGGGGCCGCAATCAGAAGACTCTATTCAGCCAACCCTTATGGGCAATCGCTTATGTATTGTTCCCCACCAGGTTTTCATGTTCCAATTGAAACTCAAAACATGAATGATGGTAGGATTTTCCAACCTCAACCACATCCTATGGGGATTTTTCAGCCACCAAGAAACCAAATTCCATCACATGCTTTGCCAAATCCATCTTCAAATGATAGCACCAAGCCATATATCATGCAACTTGAGAAACCTATCAAGAAGACTGATTTCATTGATTTGGTTAATAAGGATGATGACAACTCAGATGTTCATGCATTGGATTTAACACTCAAGCTTTAG 456 0.4145 MANDFSNMKQGVPYSVACRFCNRVFMSNEAFITHMESHMENEGAAIRRLYSANPYGQSLMYCSPPGFHVPIETQNMNDGRIFQPQPHPMGIFQPPRNQIPSHALPNPSSNDSTKPYIMQLEKPIKKTDFIDLVNKDDDNSDVHALDLTLKL* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4080 151 ProSitePatterns Zinc finger C2H2 type domain signature. 18 38 IPR013087 -
Mal1g4080 151 ProSiteProfiles Zinc finger C2H2 type domain profile. 16 43 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4080 Mal-Chr1 88843276 88843731 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g4080 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4080 - K09228 mtr:MTR_1g041455 190.66