Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4052 ATGCCATTTCATTTGCCAGCCTCTCTTCCTCCAAATAGCCTCTCCAAAAGCTTCCACAATCGAACGATGAATCAGGAAGACTTGTCAAAGATTTCACCGTCGCTGGTTTCTTTGGCCACTCTACTAGACCGTGAGCTTCGAGAAGAGGAAGGAGAAAAAACTTTCGTTAAGTATGGAGAAGATAGCATGACCAAGAAAGGAGAAGATTATGGTCTGATCAAAACATGTTGCCACAGGGTTCCTGGAGATCCATCAACTGCTTTTTCAGTCTTTGCAATTTTTGACGGGCATAATGGCATATCAGCCGCAATTTATGCAAAAGAAAACTTGCTAAATAATGTTTTGAATTCAATACCACAAGATATTATCAGCAGCAGTAGGGATGCATGGCTACTTGCCCTTCCTCGTGCTCTAGCGACTGGTTTTGTGAAGACTGACATGGATTTTCAGAGTATCAAGGGAGGAAAGTCTGGAACAACAGCTACATTAGTTGTGGTTGATGATTGTATTGTCACGGTTGCATCTGTTGGTGATTCGCGTTGCATATTAGTAGATACTGAAGGAGGAGGCGTAGTTTCTGTCCTTACGGTTGATCACAGGGTGGAAGATAATGTGGAAGAGAGGGAGCGTGTTACTGCAAGTGGTGGTGAAGTAAGAAGACCCGATATTCGTGGTGGCCCTCTTCGTGTCTGGCCTGGTGGATTATGTCTATCTAGATCAATAGGAGACGCGGATCTGGGAAAATATATCGTTCCAATACCACATGTTAAGCAAGTCAGACTACTTTCAAATGGTGGTGATGGCGGCGGAAGGCTTATCATAGCCTCTGATGGTGTTTGGGATGCTTTATCGAATGATATGGTGGAAGCATCGTGTCGGGGTGTAGCTGCTGAATTTGCTGCAAAGCTAGTGGTTGAGGAAGCTATAAGATCAAAAAAAGGCTTGAAGGATGATACAACCTGCATGGTTGTAGATATTCCTTCTGATCACCTCCCTGTATTACTACCAAGTCCAACTCCAAGAAAGAAATTATGCAATGTGCTAAACCCGCTTCTTTGTCCTTTTGGAAAGAAATCTCAGAAGAACTCTACAAACAAAGCTACCAGAAAGGTTAGTGTTGTTGTGGAAGAGTTATTTGAAGAGGGTTCTGCGTTTATAGACAGGTTTGGTAATGATTTTTTAGTTAATAATAACAACTCTGATCAGACTTTGATCTGTGCAATTTGCCAAGGGGATCAACCCCTTGGTAACGGTCTATCAGGACCGTTGTTGTCTCCATTGGAAGGACCATTTCTCTGCACAAACTGTCGAAAGAGAAAAGATATCAAGGAAGGAAAGAGGCCATCACAATAA 1353 0.4279 MPFHLPASLPPNSLSKSFHNRTMNQEDLSKISPSLVSLATLLDRELREEEGEKTFVKYGEDSMTKKGEDYGLIKTCCHRVPGDPSTAFSVFAIFDGHNGISAAIYAKENLLNNVLNSIPQDIISSSRDAWLLALPRALATGFVKTDMDFQSIKGGKSGTTATLVVVDDCIVTVASVGDSRCILVDTEGGGVVSVLTVDHRVEDNVEERERVTASGGEVRRPDIRGGPLRVWPGGLCLSRSIGDADLGKYIVPIPHVKQVRLLSNGGDGGGRLIIASDGVWDALSNDMVEASCRGVAAEFAAKLVVEEAIRSKKGLKDDTTCMVVDIPSDHLPVLLPSPTPRKKLCNVLNPLLCPFGKKSQKNSTNKATRKVSVVVEELFEEGSAFIDRFGNDFLVNNNNSDQTLICAICQGDQPLGNGLSGPLLSPLEGPFLCTNCRKRKDIKEGKRPSQ* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4052 450 CDD PP2Cc 65 326 IPR001932 -
Mal1g4052 450 ProSiteProfiles PPM-type phosphatase domain profile. 69 326 IPR001932 -
Mal1g4052 450 Pfam Protein phosphatase 2C 83 311 IPR001932 -
Mal1g4052 450 Gene3D - 55 330 IPR036457 -
Mal1g4052 450 PANTHER ALPHABET, ISOFORM E-RELATED 25 425 - -
Mal1g4052 450 SUPERFAMILY PP2C-like 65 327 IPR036457 -
Mal1g4052 450 SMART PP2C_SIG_2 72 326 IPR001932 -
Mal1g4052 450 PANTHER PROTEIN PHOSPHATASE 2C 5-RELATED 25 425 - -
Mal1g4052 450 SMART PP2C_4 45 324 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4052 Mal-Chr1 87211920 87213272 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4052 23 450 PP2C-type Phosphatase Gene Family AT1G09160 59.819 1.03e-164 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4052 - - tcc:18600536 478.018