Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g4042 ATGTTAGCGATATCCCCTCCCCTGTTTTCAACAATTGGATGGCCCTTTGAGGAGCCTTTAAGCCATAACCAGCATCAGAATCACATCTACAACGACACTGCTGATCAAGTTGAGGCAGAAATTAATTCAACTGATCCCTCACAATCCACAAGCAGTGACCTTGGCATGGTCAAGAAGCTTGTCCATAATGCTAGTGAACGCGATCGCCGCAAGAAGATCAATAATTTGTATTCTTCACTTCGTTCACTTCTTCCTTTGTCAGATCATATGAAGAAATTGAGCATTCCAGCAACAATTTCAAGAGTCCTAAAATACATACCTGAATTACAGAAGCAAGTGGAAGGACTAATTAAGAGAAAAGAAAATATCTTATTGAGACTTTCTCCAGAAGTAGATGAAGTTATTATAAGCAAAGAATCTAAAAAGAAGAAGCAAAGTTACAACTCTGGTTTTGTTGTTTCAACAAGTAGGCTCAATGATAGTGAAATTTCTATTCAAATTTCATGTTACACTGTCAACAAGATTCCACTCTCTGAGATCTTGGTGTGTTTGGAAAATGAAGGTCTTTTGCTGCTTAATGCTTCTTCATCCCAGACCTTTGGAGGGAGACTCTTCTATAATTTGCATTTCCAGGTTGATAAAACACAGAGATTAGAATCCGATATTCTAAATGAGAAGCTCTTATCAATAATGGAAAAGGAAGGAGGGTTATCAAAACAATAA 723 0.3734 MLAISPPLFSTIGWPFEEPLSHNQHQNHIYNDTADQVEAEINSTDPSQSTSSDLGMVKKLVHNASERDRRKKINNLYSSLRSLLPLSDHMKKLSIPATISRVLKYIPELQKQVEGLIKRKENILLRLSPEVDEVIISKESKKKKQSYNSGFVVSTSRLNDSEISIQISCYTVNKIPLSEILVCLENEGLLLLNASSSQTFGGRLFYNLHFQVDKTQRLESDILNEKLLSIMEKEGGLSKQ* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g4042 240 PANTHER TRANSCRIPTION FACTOR ORG2-RELATED 1 233 - -
Mal1g4042 240 Pfam Helix-loop-helix DNA-binding domain 58 110 IPR011598 GO:0046983
Mal1g4042 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 57 109 IPR011598 GO:0046983
Mal1g4042 240 Gene3D - 51 146 IPR036638 GO:0046983
Mal1g4042 240 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 233 IPR015660 GO:0003700|GO:0006357
Mal1g4042 240 SMART finulus 63 115 IPR011598 GO:0046983
Mal1g4042 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 58 124 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g4042 Mal-Chr1 86497710 86498890 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g4042 1 233 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G56970 40.157 1.78e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g4042 HLH 5.2e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g4042 - - mtr:MTR_1g048750 334.339