Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3960 ATGGAGCAAAAAATATTCTCTGTTCTGCTTGTATTCAAAGAGTTCAAGCCACACTTAGTCATGGTATTTGGCCAGTTGGGCTATACCTTGTTATATTTTATCACTGAAGCTTCCTTCAATCATGGAATGAGTCCTTGCGTGTATGTTACTTATCGCCATGTTGTGGCTGGGTTTGTGATGTTCCCTTTTGCCTACTTTCTAGAGAAAAATGTAAGACCAAAGCTGACATTTTCTCTATTTATGGAATTTTTTGTGCTTTCAGTGTTGGGGATCAGTTTGACACTAAATATGTACTTTGCAAGCTTCAAGTGCACTTCTCCAACCTTTATTGCTTCCATGGTCAACAGCATAGCTTCACTTACCTTCATTATTGCAGTGGCACTCAGGTTTGAGGTTCTTGAACTTGGAAATCCTCATGGTATATCAAAAGTCCTTGGTACCTTAATATCCTTAGCTGGTGTTATGACCATGACACTATACAAAGGACCTGTTATGAACAATTTTTGGCATCCTCTAATTAATATTCAACCAAAAATTGCTTCTTCTGTAAATGAGAAGAACCAGCTTAAGGGTTCACTACTTATAGTTTCATGCTGTGTTACATGGTCTATATGGTTCATTATGCAGGCATCGACTCTAAAAAGATACCCTGCTCAATTATCACTCACTACATGGATGTGTTTTATTGGAGCAGCACAATCAGCTATTTTCGCAGTGATAGCAGAACATAATAACCCCTCAGCATGGATTATAGGGCTCAACATTGACTTGTGGTCCACAATATATGGGGGAATTGTTGTTAGCGGTTTGTTGACGTACATTCAACTATGGTGCACCGAGAAAAAAGGACCAGTTTTTGTCACAATGTTTAACCCTCTTAGTACCATATTTGTGGCAATTCTGGCATACTCTGTCCTTGGTGAAAAACTTTACTTGGGCAGCATCATAGGTGCAGTTATTATCATCATGGGACTGTACTTGTTACTGTGGGGGAAAGAAGGTGACAGAGAGGTTGATTTCAAGACCAAAGGTAAATTGCAGTGCTATAGTGAAGACCAAGAATGCAGAATATAG 1074 0.3911 MEQKIFSVLLVFKEFKPHLVMVFGQLGYTLLYFITEASFNHGMSPCVYVTYRHVVAGFVMFPFAYFLEKNVRPKLTFSLFMEFFVLSVLGISLTLNMYFASFKCTSPTFIASMVNSIASLTFIIAVALRFEVLELGNPHGISKVLGTLISLAGVMTMTLYKGPVMNNFWHPLINIQPKIASSVNEKNQLKGSLLIVSCCVTWSIWFIMQASTLKRYPAQLSLTTWMCFIGAAQSAIFAVIAEHNNPSAWIIGLNIDLWSTIYGGIVVSGLLTYIQLWCTEKKGPVFVTMFNPLSTIFVAILAYSVLGEKLYLGSIIGAVIIIMGLYLLLWGKEGDREVDFKTKGKLQCYSEDQECRI* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3960 357 PANTHER WAT1-RELATED PROTEIN 15 346 - -
Mal1g3960 357 Pfam EamA-like transporter family 39 157 IPR000620 GO:0016020|GO:0016021
Mal1g3960 357 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Mal1g3960 357 PANTHER WAT1-RELATED PROTEIN 15 346 IPR030184 GO:0016021|GO:0022857
Mal1g3960 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Mal1g3960 357 SUPERFAMILY Multidrug resistance efflux transporter EmrE 225 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3960 Mal-Chr1 81785239 81787213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3960 16 356 Nodulin-like Gene Family AT5G07050 41.477 1.01e-89 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3960 - - gmx:100527877 548.51