Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3919 ATGGCGAAGGGTGACGATTCTATACTAAAAAAGAAGAACAAAAAGTTTAGGAAAAGACAAAACAGCAAGAATGATTCATCTTCCGTCTCTGCAAAGATTGCCGCTGTTATCGCCGCCAAGAAGCGCCGCAAGGCCGGAAAACGCCGCATCTGCGAGGGAATGTGCTTTAGTTTACCTAGTCTAGATGATCCATTCAATGATAGACGCGGCAAACCGGAATTCAAAACAAGTGATCCTGAAAAGAAAACACCTTCCCAAAAAGAAAAAAAGACAGTTCCTGTTAAAGGGAAGACTGCACCCAGCAGCAGGAAAGGCACAGTTGGTGGTGGTCAGAAATCGAATCAACAAACAGATAAAACGGAAAATGTTGAGGCGAATCAGATGCCTGACCTTTGCTGTGGTAAACAGCATGATAATGAAATTTCAGACTTCCCTTCGAAGTTTGTTTTTTGGTGTCTGAGTGCAATTGAAAACGCACTCCGACATGATGATGCCTACACTGATGGAGAGGGAAACTCTTTCTTTCTTAACCCGTGGGGATTAGAATTTTCAAAGCATTTTCCTACTGGTAAAGATCTCATGGACACCAGTGGAACCTTTGCTACTACGGAGCAAATTGCATGGATGGTTTCTGCCGCAGCTGATATTTTTGTTAGAAAAGAGAAACAAGGCTTATCATTAGACAGCCCCTTTCTTTTGTTCCTCGTTCCTTCCGAAAAAAAAGCTGCCCAGGTTCGAACGGTTTGCAAGCCTTTGAAATCTTTAGGAATACATACAGTGAGTGTTCATCCTGGAGCTTCCTTAGGTCATCAGATTCAAGGTCTGAAAAGTTGTGAGCCTGAGTTTCTCATTGCTACTCCTGAGAGGCTCTTGGAGCTTGTTTCATTGAAGGCAATTGATATTTCTGGTATCTCTATGCTGGTTATTGATGGGCTCAATGCTATTTGTAATGCTGGCCACGCTGATGCAATAAAATCCATCAAGAAGTTTATTTCTGGAAATCCCAGTCTTGTGGTTTTCAATGATAGCTTCAACCATACATCTATCCCAGTGGTTCAGCATCTTCTGACTGGACCTATTTGTAGAATATCTATCAATAATTCAATCACCAGCTTAAGTTCGTGCATTGTACAGTCTGTTCAAGTGTGTACATCAGACGAAGATAAACTTGTTAAGAGCATTGAAGTCCTGTGTCAATTTTGGAGCAGCCAGACTCATAGTTCAAACCTTCTATATATTTTGAGGAAGGATGTCAAGTGCCATAAATTGGTGAAGGCTCTCAAATCCATGGGTTGTTCCACGTCGCTTGATTCTGATGCAGCGACTATTAATGATAGGAGACTGGTTACAATGATTGATTTGGAGGATATCTCTACTGCGGATATAGGGGTGTATGATGTAATAGTCCTACCAAGTTTTGTACCCTCTATGGGCACTTATGAGCATATTTTGACAAACATGGCCCGCCAAAGTGTCAATGGTGTTTTGCATGGTTTCTTAACAAAAAGCGATACAGAACATGCTGGACCACTCATCTCAATTCTTGAACAATGTGGGCAGGAAGTGCCCGAGACCCTGAAAGATCTTCATCAGGCATCAAGCATGTCGGAAGATTGA 1617 0.4205 MAKGDDSILKKKNKKFRKRQNSKNDSSSVSAKIAAVIAAKKRRKAGKRRICEGMCFSLPSLDDPFNDRRGKPEFKTSDPEKKTPSQKEKKTVPVKGKTAPSSRKGTVGGGQKSNQQTDKTENVEANQMPDLCCGKQHDNEISDFPSKFVFWCLSAIENALRHDDAYTDGEGNSFFLNPWGLEFSKHFPTGKDLMDTSGTFATTEQIAWMVSAAADIFVRKEKQGLSLDSPFLLFLVPSEKKAAQVRTVCKPLKSLGIHTVSVHPGASLGHQIQGLKSCEPEFLIATPERLLELVSLKAIDISGISMLVIDGLNAICNAGHADAIKSIKKFISGNPSLVVFNDSFNHTSIPVVQHLLTGPICRISINNSITSLSSCIVQSVQVCTSDEDKLVKSIEVLCQFWSSQTHSSNLLYILRKDVKCHKLVKALKSMGCSTSLDSDAATINDRRLVTMIDLEDISTADIGVYDVIVLPSFVPSMGTYEHILTNMARQSVNGVLHGFLTKSDTEHAGPLISILEQCGQEVPETLKDLHQASSMSED* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3919 538 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 1 535 - -
Mal1g3919 538 Pfam DEAD/DEAH box helicase 226 331 IPR011545 GO:0003676|GO:0005524
Mal1g3919 538 MobiDBLite consensus disorder prediction 1 31 - -
Mal1g3919 538 Gene3D - 221 372 IPR027417 -
Mal1g3919 538 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 ISOFORM X1 1 535 - -
Mal1g3919 538 MobiDBLite consensus disorder prediction 56 122 - -
Mal1g3919 538 MobiDBLite consensus disorder prediction 104 122 - -
Mal1g3919 538 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 225 359 IPR027417 -
Mal1g3919 538 MobiDBLite consensus disorder prediction 64 94 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3919 233 529 Eukaryotic Initiation Factors Gene Family AT1G72730 20.065 2.60e-07 51.2