Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3884 ATGGCAAAGAGGAAGAGCTGGTTTGGATGGGTGAAAAGTCTATTTATTTCCGAGTCAAAGGACAAAAAGCAAAAGAAATGTGGATGGAGATTTTCAAGGATTAAACAGAAGCTATTATACCCCAAAATTACAGCTTCAAACAGAACATTGATTGAAGCAAGTGCAGAACAGAGAAAACATGCTTTGGCTGTGGCTATTGCAACAGCATCTGCTGCAGAGGCTGCAATTGCTGCTGCACATGCTGCTGCCGAGGTTGTCAAGCTCACAAGTGGTGACTCGCATTCTTATTCATATCTATCCAAAGGAGACAGAAGTTTGGCTGCCATCAAGATTCAAAGCGCCTACCGTGCACATCTTGCTAGGAAAGCATTAAGAGCATTGAAGGGAGTTATAAGACTTCAAGCCATAATTCGCGGTGAAGCTGTTAGGCGTCAAGTGTCCAGAACTTTGAAGAATATTCCCTCAAATGCAAGAACTCAGAAGGAAATATTCCAGGAAAGAATCAGCCATACAGAGGAAGAATATTACAAAAAAGACCATATAAAACAATTTCCAAAGCAGAAGAAAAAGGTGGAAGAGAATGAACTTAAGCCTGAACTCCATAGTCAAAGAACTTGGAATTGTAGCTCACACTCAAGAGAAGACATTGAAGCCATATGGTTAAGAAAGCAAGATGCTATTGTCAAAAGAGATCGGATGAGGCAATATTCTTCTTCACAAAAGGAGAGAATGTTTTCCCAAAGGGTGGAAGAATCTGTGCACAACAAAGAATTTGGTGAAGATTGTTGTCGTACTCTAGGAGAGTGGCTACATAAAGAAACATGTAACTGGGATGTTCTTTATAAACCAGATCAACCTTCAAATATCACAATAAGAAATAAAGTGCAAGAAGGATTGGGATCACAAGTTTCAGTCCAAAGAAAATCATTTTCTCATGTAAAAAGAAGTTCAATCGGAGACGAGAGTTCCATGCCAAATTCTCCAGTTTTTCCTAAGTACATGGCTGTGACTGAATCTAGCAAAGCAAAGGTAAGGTCTATGAGCACACCAAGGCTAAGAACAGTATTATTGGATGTGTGTTCAAATCAGAACGAGCACCAACGCATGAATTTCTAA 1116 0.397 MAKRKSWFGWVKSLFISESKDKKQKKCGWRFSRIKQKLLYPKITASNRTLIEASAEQRKHALAVAIATASAAEAAIAAAHAAAEVVKLTSGDSHSYSYLSKGDRSLAAIKIQSAYRAHLARKALRALKGVIRLQAIIRGEAVRRQVSRTLKNIPSNARTQKEIFQERISHTEEEYYKKDHIKQFPKQKKKVEENELKPELHSQRTWNCSSHSREDIEAIWLRKQDAIVKRDRMRQYSSSQKERMFSQRVEESVHNKEFGEDCCRTLGEWLHKETCNWDVLYKPDQPSNITIRNKVQEGLGSQVSVQRKSFSHVKRSSIGDESSMPNSPVFPKYMAVTESSKAKVRSMSTPRLRTVLLDVCSNQNEHQRMNF* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3884 371 Gene3D - 103 153 - -
Mal1g3884 371 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Mal1g3884 371 PANTHER IQ-DOMAIN 5-RELATED 1 368 - -
Mal1g3884 371 Pfam Protein of unknown function (DUF4005) 319 353 IPR025064 -
Mal1g3884 371 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Mal1g3884 371 SMART iq_5 103 125 IPR000048 GO:0005515
Mal1g3884 371 PANTHER IQ-DOMAIN 12 1 368 - -
Mal1g3884 371 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3884 Mal-Chr1 77898986 77901166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3884 1 358 IQD Protein Family AT5G03960 43.432 5.10e-67 215