LGRPv2

Gene search

Sequence information

Show entries

Search:

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mal1g3846	ATGCTCACGAACCTAGGAGAACAAGAACTGCCTCTAGCTGTTTCTCCTCGAGGCGTCGCGTCGCGGGGCTCCTTGCCTGCGACGCGTGTTGAACAGAAGGTACCTCTGGCTTATTTTCTTCCATTTCTTCACACCAAAACGTCCATGATGACCAAGCCCCAAGAATCACTTGAATTCTTGCACGAAAACTTAGTACGATCGCAGAGTTGTCTGGTTTGGGTGGACTTCCACGGTGTTGCAACTTTTTCCTCATGTTTTGTTGTTGTATGCTATTATTCATTAGTTAACCGTATTATTCAACCAAAAAACCAAGGATTTGAAAATTTTACAAAGACAAACTTTGAAGCATACACTGGTTTTAGAGGTGTCAACAGTGGTGGTAAGCTCCCAAGAGTACATAGAGGACCGAAGGGTGGCGGGCATTTCTATCCAGTTTTAACAGGCAGACGAGATAGCCTGCAATCATTTTTCCAGGAAGCAACTGATCAAATTCCAAGTCCTGACGATAACATTACGCGCACACTGCACCTCTTCAATCTTAGAGGATTCAACGCACGGGCAACAGTCAGCCTCCTTGCTGAGATCGTGATCACGCACTTTTTTAAAACCTTGAATATGACTAATGAGCTATGTTGGTTTTTTTATTTCCTTAGTCTGATGAGGCAAAATTGTCCAGACAGCAATAAGAATAATATCAGCAGCAATGGAACGTTTTCGACATTTACAGTTTCAAAGCCAATGAGTGGTCATCACTCTAATAACAAAGGGATGGCATACATGCAAGCATTGTCATCTGCAGTGCCATCTGGAGCATCTTTTGACACTCACTACTATCAGAGTTTGTTGAGAGGAAAAGGGTTATTGTTTGTTGATCAACAACTGATGGCTGAAGAGAAGACTGCCACATTGGTTTCTGCTTATGCTTCATATGACGGATCGACCTTTCGGATGGATTTCGCAAGGGTTATGTTGAAATTGTCTAACCTTGATGTTTTGACTGGAAATCAAGGCCAGGTTCGTCTGAATTGCTCAGAGCTCGCAAGTTCTTAA	1050	0.4295	MLTNLGEQELPLAVSPRGVASRGSLPATRVEQKVPLAYFLPFLHTKTSMMTKPQESLEFLHENLVRSQSCLVWVDFHGVATFSSCFVVVCYYSLVNRIIQPKNQGFENFTKTNFEAYTGFRGVNSGGKLPRVHRGPKGGGHFYPVLTGRRDSLQSFFQEATDQIPSPDDNITRTLHLFNLRGFNARATVSLLAEIVITHFFKTLNMTNELCWFFYFLSLMRQNCPDSNKNNISSNGTFSTFTVSKPMSGHHSNNKGMAYMQALSSAVPSGASFDTHYYQSLLRGKGLLFVDQQLMAEEKTATLVSAYASYDGSTFRMDFARVMLKLSNLDVLTGNQGQVRLNCSELASS*	350

Showing 1 to 1 of 1 entries

Annotation information

Show entries

Search:

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mal1g3846	349	PANTHER	PEROXIDASE 25-RELATED	138	345	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Mal1g3846	349	Pfam	Peroxidase	139	309	IPR002016	GO:0004601\|GO:0006979\|GO:0020037
	Mal1g3846	349	SUPERFAMILY	Heme-dependent peroxidases	139	344	IPR010255	GO:0004601\|GO:0006979\|GO:0020037
	Mal1g3846	349	PANTHER	PEROXIDASE	138	345	-	-
	Mal1g3846	349	Gene3D	Peroxidase, domain 2	165	326	-	-
	Mal1g3846	349	PRINTS	Plant peroxidase signature	280	297	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Mal1g3846	349	PRINTS	Plant peroxidase signature	139	154	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Mal1g3846	349	PRINTS	Plant peroxidase signature	264	279	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Mal1g3846	349	PRINTS	Plant peroxidase signature	321	334	IPR000823	GO:0004601\|GO:0006979\|GO:0020037
	Mal1g3846	349	ProSiteProfiles	Plant heme peroxidase family profile.	139	347	IPR002016	GO:0004601\|GO:0006979\|GO:0020037

Showing 1 to 10 of 11 entries

Previous1 2Next

Duplication type information

Show entries

Search:

Select	Gene	Chromosome	Start	End	Duplicated_type
	Mal1g3846	Mal-Chr1	76290658	76294249	Transposed

Showing 1 to 1 of 1 entries

Functional genes information

Show entries

Search:

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mal1g3846	138	345	Peroxidase	AT4G33870	37.118	1.09e-28	113

Showing 1 to 1 of 1 entries

Pathway information

Show entries

Search:

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mal1g3846	K00430		-	gmx:100804973	263.848

Showing 1 to 1 of 1 entries