Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3838 ATGATGATGATGATGAACAAGTGTTCTTCTCATCGTTCTTGTGATTTCAACAACTACGAACAGCAACAAAAGAACGTTTATGATCATTCTAACGATTGGTCTCTTGCAAATGATGATCAGAAAAAGAATCATGGTTCTTCAATATCAAGAAGAATGTTCAAATGTGATTTGTGCCACAGAATCTTCACTTCTGGTAGTGCACTTGGTGGCCACAAATCACATCACTACCGCTCCGTTCACCTTCTTCAACCTCTCACCAAGAAACACAAACATGATGTTCTTGATGATCATAGGAAACTGAAACATGCATGTCATCACTACAACAATGTTCTGAGTTTGAAGGTTATTGAATCGCAAAACACATCCTCCTCCTTGGAACAACAGAGTAATATGTGTGATCATGATCAATTTCAAGTGGGTGGTGCTGCACCACCAACTATTGACTTATCAAAATATTTGCCTCCAAGGTCCTATGAAACCAAAAAACGCAGCATCAGAAGAAGAAATATGATTGATCATGAACTTGTTAATGCAGCAACTATACTCTTTCATATGTCTCGTTCTGCTTCTGTTGTTGATGGTGATCATGGTCACACTCCTAAAAGGCTCAAACTTTCAAGCAATGCTGCAGATAGTGGTGACATTGATGAAACACCAGTGACCAAGGTGAAGAAGGGTATTAATAACAGTGAAAAGAACTTGGTGCTGAGATTCAAGATTCATCCTTCATCATCTGAAGACAACAACATCTGGCATTGCAATCAACATGCCTCTAATAACATTGATGAAACACCAGAGAGCAAGGTGAAGGATAATGATATTAATAACAACATTAAGAAGAGTTTGGTGCTGAGATTCAAGATTCCACATTCTTCATCTAAAGAGAACAAGATCTTGCAGACCTCAGAAGATTGCAGCCAACATGGCTCTATTGACATTGAAGAGAAGAAGAAAAATAATGAAGGTGTTGGTGAAACAGGGAGGGAACAGAGTCATAATGAATTGAAGTCAAAAAGAGTTGTTAGGAATTTTGATTTGAATGAGCTTCCAATGGAAGATGATGTTGCATATGATTGA 1077 0.3798 MMMMMNKCSSHRSCDFNNYEQQQKNVYDHSNDWSLANDDQKKNHGSSISRRMFKCDLCHRIFTSGSALGGHKSHHYRSVHLLQPLTKKHKHDVLDDHRKLKHACHHYNNVLSLKVIESQNTSSSLEQQSNMCDHDQFQVGGAAPPTIDLSKYLPPRSYETKKRSIRRRNMIDHELVNAATILFHMSRSASVVDGDHGHTPKRLKLSSNAADSGDIDETPVTKVKKGINNSEKNLVLRFKIHPSSSEDNNIWHCNQHASNNIDETPESKVKDNDINNNIKKSLVLRFKIPHSSSKENKILQTSEDCSQHGSIDIEEKKKNNEGVGETGREQSHNELKSKRVVRNFDLNELPMEDDVAYD* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3838 358 Pfam C2H2-type zinc finger 53 77 - -
Mal1g3838 358 MobiDBLite consensus disorder prediction 293 307 - -
Mal1g3838 358 MobiDBLite consensus disorder prediction 293 339 - -
Mal1g3838 358 ProSitePatterns Zinc finger C2H2 type domain signature. 55 75 IPR013087 -
Mal1g3838 358 MobiDBLite consensus disorder prediction 193 217 - -
Mal1g3838 358 ProSiteProfiles Zinc finger C2H2 type domain profile. 53 75 IPR013087 -
Mal1g3838 358 MobiDBLite consensus disorder prediction 308 339 - -
Mal1g3838 358 SUPERFAMILY beta-beta-alpha zinc fingers 50 78 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3838 Mal-Chr1 76045426 76046502 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3838 48 76 C2H2 Transcription Factor Family AT5G61470 58.621 5.94e-06 45.8