Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3837 ATGATGAACAAGTGTTCTTCTCATCGTTCTTGTGATTTCAGCAACTACGAACAGCAACAAAAGAACGTTCATGATCATTCTAACGATTGGTCTCTTGCAAATGATGATCAGAAAAAGAATCTTGGTTCTTCAATATCAAGAAGAATGTTCAAGTGTGATTTGTGCCACAGAATCTTCACTTCTGGTAGTGCACTTGGTGGCCACAAATCACATCACTACCGCTCCGTTCACCTTCTTCAACCTCTCACCAAGAAACACAAACATGATGTTCTTGATGATCATAGGAAACTGAAACATGCATGTCATCACTACAACAATGTTCTGAGTTTGAAGGTTATTGAATCGCAAAACACATCCTCCTCCTTGGAACAACAGAGTAATATGTGTGATCATGATCAATTTCAAGTGGGTGCTGCTGCACCACCAACTATTGACTTATCCAAATATTTGCCTCCAAGGTTCCATAAAACTAAAAAACGCAGCAGTATCAGAAGAAGAAATATGATTGATCATGAACTTGTTAATGCAGCAACTATACTCTTTCATATGTCTCGTTCTGCTTCTGTTGTTGATGGTGATCATGGTCACACTCCTAAAAGGCTCAAACTTTCAAGCAATGCTGCAGATAGTGGTGACATTGATGAAACACCAGTGACCAAGGTGAAGAAGGGTATTAATAACAGTGAAAAGAACTTGGTGCTGAGATTCAAGATTCATCCTTCATCATCTGAAGACAACAACATCTGGCATTGCAATCAACATGCCTCTAATAACATTGATGAAACACCAGAGAGCAAGGTGAAGGATAATGATATTAATAACAACATTAAGAAGAGTTTGGTGCTGAGATTCAAGATTCCACATTCTTCATCTAAAGAGAACAAGATCTTGCAGACCTCAGAAGATTGCAGCCAACATGGCTCTATTGACATTGAAGAGAAGAAGAAAAATAATGAAGGTGTTGGTGAAACAGGGAGGGAACAGAGTCATAATGAATTGAAGTCAAAAAGAGTTGTTAGGAATTTTGATTTGAATGAGCTTCCAATGGAAGATGATGTTGCATATGATTGA 1071 0.3819 MMNKCSSHRSCDFSNYEQQQKNVHDHSNDWSLANDDQKKNLGSSISRRMFKCDLCHRIFTSGSALGGHKSHHYRSVHLLQPLTKKHKHDVLDDHRKLKHACHHYNNVLSLKVIESQNTSSSLEQQSNMCDHDQFQVGAAAPPTIDLSKYLPPRFHKTKKRSSIRRRNMIDHELVNAATILFHMSRSASVVDGDHGHTPKRLKLSSNAADSGDIDETPVTKVKKGINNSEKNLVLRFKIHPSSSEDNNIWHCNQHASNNIDETPESKVKDNDINNNIKKSLVLRFKIPHSSSKENKILQTSEDCSQHGSIDIEEKKKNNEGVGETGREQSHNELKSKRVVRNFDLNELPMEDDVAYD* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3837 356 ProSitePatterns Zinc finger C2H2 type domain signature. 52 72 IPR013087 -
Mal1g3837 356 Pfam C2H2-type zinc finger 50 74 - -
Mal1g3837 356 MobiDBLite consensus disorder prediction 291 305 - -
Mal1g3837 356 MobiDBLite consensus disorder prediction 291 337 - -
Mal1g3837 356 ProSiteProfiles Zinc finger C2H2 type domain profile. 50 72 IPR013087 -
Mal1g3837 356 MobiDBLite consensus disorder prediction 306 337 - -
Mal1g3837 356 SUPERFAMILY beta-beta-alpha zinc fingers 47 75 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3837 Mal-Chr1 76014283 76015353 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3837 45 73 C2H2 Transcription Factor Family AT5G61470 58.621 5.58e-06 45.8