Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3813 ATGTCGAAATGGTTTCTCTCCCACATTGTTGTTTTAGGTCTCACCACAAGAAGAAAATCAACCCTCCAAATTTCACTCAGATTCTGCACCACAACAACAACCACATCAGAATCAAACACACACCCATTTGCTGTTACCTACCTCATCAACAATTTCGGTTTCACACCTGAATCAGCTCTCAAAGCCTTCAACCAAAAACAGGTTATTTTCCAATCCCCACAAAAACCTAATTCAGTTATCAATTTCTTCAAAAACCGTGATTTTTCACACTCCAACATACAAATCATCATTAGAAAAGCGCCATGGTTACTTTCATCACAACCCCACAATGTAATTTTGCCAAAGTATCGATTTTTACAATCCAAAGGTCTTTCTTCTTCTGATATTGTTTCATTGTTAACTGAAAACCCTAGAATTTTACAGACTAGCTTGAAGAAACGAATAATCCCTCTTTTTGAATTCTTGAGTAGGTTTTTTCAAACCAATAAGGATATTATTGTTTGCTTAATTCGAAATTCGCGTTCATTTGTTCTTAATCCGTATCACATTCTTGTGGCTAATGTCAATTTTATGACTGATTTTGGAGTTTGTGATTCTACCATTGCTAGGTTGCTTCAAACAAGCCCATTTATATTTGGTTCAACTGATTTGATTAAATCGTTGGAGGAAGTTAAGGGTTTAGGGTTTGATCCTTCGAAGACTACTTTTGGGGATGCTTTGATAGCCAAGAAATGGACAAGTAGAACACTTTGGGATGAGAAATTTGATGTCTTTAAGAAATGGGGTTGGTCTGATGATGATTTTTTTCAAGCTTTTAGGTTGCATCCTAGTTTGATGATGGCTTCAATTGAAAAGATTGATTTTTTGATGAGTTTTTGGGTCAACGAATTGGGTTGGGATTTGTTGGCACTTATTAAATGTCCGCATATGTTTAGTTATAGTTTGGAGAAAAAGATCATTCCAAGGGCCTCGGTACTGCAATTTCTTTTGATGAAAGGTTTGCGAAATAAGAAGGCAAGTTTAGTTACACCATTTGATTATTCTGAGAAATTGTTCCTGAGCAAGTTTGTTTTCAGCTTTAAGGGGGAGTTCGGTTATCTATTAAAGTTATATGAGGAAAAAATGAAACTTCCGTACTCCAAGGAAAACAACGTCATGCCATTCACTAAATAG 1173 0.3581 MSKWFLSHIVVLGLTTRRKSTLQISLRFCTTTTTTSESNTHPFAVTYLINNFGFTPESALKAFNQKQVIFQSPQKPNSVINFFKNRDFSHSNIQIIIRKAPWLLSSQPHNVILPKYRFLQSKGLSSSDIVSLLTENPRILQTSLKKRIIPLFEFLSRFFQTNKDIIVCLIRNSRSFVLNPYHILVANVNFMTDFGVCDSTIARLLQTSPFIFGSTDLIKSLEEVKGLGFDPSKTTFGDALIAKKWTSRTLWDEKFDVFKKWGWSDDDFFQAFRLHPSLMMASIEKIDFLMSFWVNELGWDLLALIKCPHMFSYSLEKKIIPRASVLQFLLMKGLRNKKASLVTPFDYSEKLFLSKFVFSFKGEFGYLLKLYEEKMKLPYSKENNVMPFTK* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3813 390 Pfam mTERF 80 211 IPR003690 GO:0003690|GO:0006355
Mal1g3813 390 Pfam mTERF 252 352 IPR003690 GO:0003690|GO:0006355
Mal1g3813 390 Gene3D Transcription termination factor 3, mitochondrial 146 369 IPR038538 -
Mal1g3813 390 PANTHER TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 21 380 - -
Mal1g3813 390 SMART mt_12 130 161 IPR003690 GO:0003690|GO:0006355
Mal1g3813 390 SMART mt_12 269 300 IPR003690 GO:0003690|GO:0006355
Mal1g3813 390 SMART mt_12 301 335 IPR003690 GO:0003690|GO:0006355
Mal1g3813 390 SMART mt_12 202 230 IPR003690 GO:0003690|GO:0006355
Mal1g3813 390 SMART mt_12 94 125 IPR003690 GO:0003690|GO:0006355
Mal1g3813 390 PANTHER CGI-12 PROTEIN-RELATED 21 380 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3813 Mal-Chr1 75539215 75540387 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mal1g3813 mTERF 4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3813 K15032 - gmx:102663414 313.153