Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3787 ATGGAAAATTGCTGTGGAAATCTATTCGGCTGGAACAAGAAACATAAACTAAAGCCCAAAAAACTGATGGTGTTAAAAAGACCCACGGGCGGACTGGTTGGGTTAGAGAGTGAACTAGAGAGAGAAGAAATCGAAATTGCGTTAGGGAGGGAATTAGGGATAGGATATTCCCGAACAACGTATCTTTGCAAAGACAGAAAAACTGGAGAAGAATTAGTGTGTAAGTCGATTTCGAAGGAGAAGCTAAGAACAGCGATTGATATTGAAAATGTTAGAATAGAGGTTGCTATCATGAGGCATTTACCTAAACATCCTAATATTGTTTCGTTGAAAGATACTTATGAAGATGATGATGATGTTCATCTTATTATGGAGCTTTGTGAAGGTGATTCACTATTCGATCGCATCGTTGCTAGAGGACATTATTTTGAGCGCACCGCAGCTTATGTCTTTAAGACCATTGTCCAAGTTGTTCAGATGTGCCACCAACATGGTGTGATGCATCGGGATATCAAACCCGAGAACTTTTTGTTTGCAGACAAGAAGGAATTAGGAGCAACTTTGAAAGTTACTGGCTTTGGTTTGTCAACTTTCTTTAAACCAGGTGAAAGATTTGATGAGATAGTTGCGAGTCCATATTACATGGCCCCTGAAGTATTAAAGAGAAATTATGGCCATGAAATAGATATCTGGAGTGCTGGAGTAATTCTTTACATCTTACTTTGTGGTATCCCTCCTTTTTGGGCAGAAACTGAGCAGGGAGTTGCCCTAGCAATTCTGAGAGCTGTTATTGACATTAAAAGGATGCCATGGCCAAATGTTTCTAATAATGCGAAAGACCTTGTTAGGAAGATGCTTGATCCTGACCCAAAGCGCCGGCTTACTGCACAGGAAGTGTTAGATCATCCATGGTTGCAGAATGCAAAGACAGCTCCTTATGTTTCATTGGGAGAAACAGTCCAAGCAAGGCTCATGCAATATTCTGTAATGAACAAACTTAAGAAAATGGCATTGAGGGTGATTGCAGAGCATTTGTCTGAAGAAGAAGAAGTTGTGGGAATAAAAGAGGGATTCCAGGTGATGGATACAGAAAACAAAGGTGAAATTAACATCGACGAACTACGAGTAGGGTTGCATAAGCTTGGCCACCGAATTCCTGATGGAGATGTCCAAATTCTTATGGAAGCTGGTGATGTAGACAAAGATGGTTACCTAGATTATGAAGACTTTGTAGCCATTTCTGTTCATCTGAGAAAGATATCCCATGATGAACACCTCCAAAGAGCATTTCAATTTTTTGATAAAAACCAATCTGGTTATATTGAACTTGAGGAGTTACGTAATTCCTTAACTGATGAGGTTGACACAGACAGTGAAGAAGTCATTAATGTAATTATGCATGATGTTGACACAGATAAGGATGGAAGAATAAGTTATGAGGAATTTGTTGCAATGATGAAGGCTGGCACATATTGGTGA 1479 0.3955 MENCCGNLFGWNKKHKLKPKKLMVLKRPTGGLVGLESELEREEIEIALGRELGIGYSRTTYLCKDRKTGEELVCKSISKEKLRTAIDIENVRIEVAIMRHLPKHPNIVSLKDTYEDDDDVHLIMELCEGDSLFDRIVARGHYFERTAAYVFKTIVQVVQMCHQHGVMHRDIKPENFLFADKKELGATLKVTGFGLSTFFKPGERFDEIVASPYYMAPEVLKRNYGHEIDIWSAGVILYILLCGIPPFWAETEQGVALAILRAVIDIKRMPWPNVSNNAKDLVRKMLDPDPKRRLTAQEVLDHPWLQNAKTAPYVSLGETVQARLMQYSVMNKLKKMALRVIAEHLSEEEEVVGIKEGFQVMDTENKGEINIDELRVGLHKLGHRIPDGDVQILMEAGDVDKDGYLDYEDFVAISVHLRKISHDEHLQRAFQFFDKNQSGYIELEELRNSLTDEVDTDSEEVINVIMHDVDTDKDGRISYEEFVAMMKAGTYW* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3787 492 ProSitePatterns EF-hand calcium-binding domain. 398 410 IPR018247 -
Mal1g3787 492 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 19 492 - -
Mal1g3787 492 SMART efh_1 389 417 IPR002048 GO:0005509
Mal1g3787 492 SMART efh_1 425 453 IPR002048 GO:0005509
Mal1g3787 492 SMART efh_1 461 489 IPR002048 GO:0005509
Mal1g3787 492 SMART efh_1 353 381 IPR002048 GO:0005509
Mal1g3787 492 ProSiteProfiles Protein kinase domain profile. 46 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3787 492 CDD STKc_CAMK 48 304 - -
Mal1g3787 492 ProSiteProfiles EF-hand calcium-binding domain profile. 349 384 IPR002048 GO:0005509
Mal1g3787 492 SUPERFAMILY EF-hand 329 487 IPR011992 -
Mal1g3787 492 Pfam EF-hand domain pair 366 415 IPR002048 GO:0005509
Mal1g3787 492 SUPERFAMILY Protein kinase-like (PK-like) 48 319 IPR011009 -
Mal1g3787 492 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Mal1g3787 492 PANTHER SERINE/THREONINE-PROTEIN KINASE 19 492 - -
Mal1g3787 492 Gene3D Transferase(Phosphotransferase) domain 1 132 313 - -
Mal1g3787 492 Gene3D - 314 488 - -
Mal1g3787 492 Pfam EF-hand domain pair 424 487 IPR002048 GO:0005509
Mal1g3787 492 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
Mal1g3787 492 SMART serkin_6 46 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3787 492 Pfam Protein kinase domain 49 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3787 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 166 178 IPR008271 GO:0004672|GO:0006468
Mal1g3787 492 CDD EFh 425 487 IPR002048 GO:0005509
Mal1g3787 492 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
Mal1g3787 492 Coils Coil 440 460 - -
Mal1g3787 492 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Mal1g3787 492 Gene3D Phosphorylase Kinase; domain 1 48 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3787 Mal-Chr1 74985549 74989950 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3787 1 492 EF-hand Containing Proteins AT5G19450 67.057 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal1g3787 Pkinase 1.1e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3787 K13412 - gmx:100815320 725.317
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3787 1 74985549 74989950 Mal1g3787 1 74985549 74989950 ECH
Mal3g3544 3 112584057 112588129 Mal1g3787 1 74985549 74989950 PCT