Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3783 ATGGGAAATTGCTGCACAAATCCAACCGGTAAACACAAACGAAAGGAAAAGCCCAGAAAAGAAGACCATGGGAAAAACAACAAAAACAAAAACAGCTTGGTGGTGTTGAAAAAGCCCACGGGCCGAGAGATAGAGCTAAGATACGAATTAGGGAGGGAATTAGGGAGAGGAGAATTTGGAATAACGTATTTCTGCAAAGATAGAGAAACGGGAGAAGAATTAGCGTGCAAATCAATTTCGAAGGAGAAACTTAGAACAGCGATTGATATTGAAGATGTTAGAAGAGAGGTTGAGATTATGAGGCATTTACCTAAACATCCTAATATTGTTTCGTTGAAAGATACTTATGAAGATGATGATAATGTTCATCTTGTTATGGAGCTTTGTGGAGGTGGTGAGCTTTTTGATCGGATTGTTGCTAAAGGACATTATACCGAACGCGCCGCCGCCACCGTGGTTAAGACCATTGTTCAAGTTGTTCAGATGTGCCACGAACATGGTGTGATTCATCGGGATCTCAAACCGGAGAACTTTTTGTTTGCAGACAAGAAGGAAACATCAGCTTTGAAAGCTATTGACTTTGGTTTGTCAATTTTCTTTAAACCAGGTGAAAGATTTAATGAGATAGTTGGGAGTCCATATTACATGGCCCCTGAAGTATTAAAGAGAAATTATGGCCCTGAAATAGATATCTGGAGTGCTGGAGTAATTCTTTACATCTTACTTTGTGGTATCCCTCCCTTTTGGGCAGAAACTGAGCAGGGAATTGCTCAAGCAATTATACGATCTGTTATTGACTTTAAGAAGGAGCCATGGCCAAAGGTTTCTGATAATGCAAAAGACCTTATTAAGAAGATGCTTGATCCTAACCCAAAACGCCGGCTTACTGCACAGGAAGTGTTAGATCATCCATGGTTACAGAATGCGAAGACAGCTCCTAATGTTTCATTGGGAGAAGCAGTCAGAGCAAGGCTTATGCAATTTTCTGTAATGAACAAACTTAAGAAAACAGCATTGAGGGTTATTGCAGATCATTTGTCTGTAGAAGAAGTTGCTGGAATAAAAGAGGGATTCCAAGTGATGGATACAGAAAATAAAGGCAAAATCAACATTGACGAACTACGAGTAGGGTTGCTTAAGCTAGGCCACCAAATTCCTGATGGAGATGTCCAAATACTTATGGAAGCTGGTGATGTAGACAAAGATGGTTACCTAGATTATGGAGAGTTTGTAGCCATCTCTATTCATCTGAGAAAGATATCCCATGATGAACACCTCCAAAGAGCATTTCAATTTTTTGATAAAAATCAATCTGGGTATATTGAACTTGACGAGTTACGTAATGCCTTAGCTGATGAGGTTGACACGAACAGTGAAGAAGTAATTAATGCAATTATGCATGATGTGGACACAGATAAGGATGGAAAAATAAGTTATGAGGAATTTGCTACAATGATGAAGGCTGGCACAGATTGGAGAAAAGCATCTAGGCAGTATTCGCGAGAGAGATTTACCAGTCTTAGTATTAAATTGATGAAGGAGGGATCATTAGAATCGAACAATGAGGGTAGATGA 1575 0.3949 MGNCCTNPTGKHKRKEKPRKEDHGKNNKNKNSLVVLKKPTGREIELRYELGRELGRGEFGITYFCKDRETGEELACKSISKEKLRTAIDIEDVRREVEIMRHLPKHPNIVSLKDTYEDDDNVHLVMELCGGGELFDRIVAKGHYTERAAATVVKTIVQVVQMCHEHGVIHRDLKPENFLFADKKETSALKAIDFGLSIFFKPGERFNEIVGSPYYMAPEVLKRNYGPEIDIWSAGVILYILLCGIPPFWAETEQGIAQAIIRSVIDFKKEPWPKVSDNAKDLIKKMLDPNPKRRLTAQEVLDHPWLQNAKTAPNVSLGEAVRARLMQFSVMNKLKKTALRVIADHLSVEEVAGIKEGFQVMDTENKGKINIDELRVGLLKLGHQIPDGDVQILMEAGDVDKDGYLDYGEFVAISIHLRKISHDEHLQRAFQFFDKNQSGYIELDELRNALADEVDTNSEEVINAIMHDVDTDKDGKISYEEFATMMKAGTDWRKASRQYSRERFTSLSIKLMKEGSLESNNEGR* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3783 524 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Mal1g3783 524 CDD STKc_CAMK 47 305 - -
Mal1g3783 524 SMART efh_1 461 489 IPR002048 GO:0005509
Mal1g3783 524 SMART efh_1 353 381 IPR002048 GO:0005509
Mal1g3783 524 SMART efh_1 389 417 IPR002048 GO:0005509
Mal1g3783 524 SMART efh_1 425 453 IPR002048 GO:0005509
Mal1g3783 524 Gene3D Transferase(Phosphotransferase) domain 1 134 314 - -
Mal1g3783 524 ProSitePatterns Protein kinases ATP-binding region signature. 54 77 IPR017441 GO:0005524
Mal1g3783 524 ProSitePatterns EF-hand calcium-binding domain. 398 410 IPR018247 -
Mal1g3783 524 SMART serkin_6 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3783 524 SUPERFAMILY EF-hand 330 499 IPR011992 -
Mal1g3783 524 Gene3D Phosphorylase Kinase; domain 1 50 133 - -
Mal1g3783 524 Pfam EF hand 355 376 IPR002048 GO:0005509
Mal1g3783 524 Pfam Protein kinase domain 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3783 524 PANTHER SERINE/THREONINE-PROTEIN KINASE 11 503 - -
Mal1g3783 524 ProSiteProfiles EF-hand calcium-binding domain profile. 421 456 IPR002048 GO:0005509
Mal1g3783 524 ProSiteProfiles Protein kinase domain profile. 48 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3783 524 Gene3D - 315 489 - -
Mal1g3783 524 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 32-LIKE 11 503 - -
Mal1g3783 524 MobiDBLite consensus disorder prediction 1 36 - -
Mal1g3783 524 Pfam EF-hand domain pair 381 412 IPR002048 GO:0005509
Mal1g3783 524 Pfam EF-hand domain pair 424 487 IPR002048 GO:0005509
Mal1g3783 524 SUPERFAMILY Protein kinase-like (PK-like) 47 314 IPR011009 -
Mal1g3783 524 ProSitePatterns EF-hand calcium-binding domain. 434 446 IPR018247 -
Mal1g3783 524 ProSiteProfiles EF-hand calcium-binding domain profile. 349 384 IPR002048 GO:0005509
Mal1g3783 524 CDD EFh 425 487 IPR002048 GO:0005509
Mal1g3783 524 ProSitePatterns EF-hand calcium-binding domain. 470 482 IPR018247 -
Mal1g3783 524 ProSiteProfiles EF-hand calcium-binding domain profile. 457 492 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3783 Mal-Chr1 74957302 74961499 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3783 1 522 EF-hand Containing Proteins AT5G19450 74.248 0.0 836
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal1g3783 Pkinase 1.3e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3783 K13412 - gmx:100815320 871.692