Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3729 ATGGATTCTCATGACGAGACAGGATGCCAGACTCCAGAGCTCCCCATACTTTGTGTTAATAATTGTGGTTTCTTTGGGAGGGCTGCTACCATGAATATGTGTTCCAAATGTTACAAAGACACGCTGTTGATGCAGGAACAGGAAAAACTAGCGGCAGCATCTGTTGAAAACTTGGTGAGTGGCGGTTCCACTCACAATGAGAAACATGTTGTGAGTGATGGTGCTGTTGATGTACAAGTTGAAAATGCGGAGGTCAAGACAGTCGGCGCTGAGATTTCTGGAGATTCATCCTCTAGTGAGAATTTAGAGATAAAAGTCAAGACAGGTCCAAGCAGATGTGCTACTTGCCGGAAGCGCGTTGGATTAACCGGTTTCACCTGCAAATGTGGAAACCTATTTTGTGCAATGCATCGCTATTCTGACAAACATGATTGCCCTTTTGATTATCAGTCTGTTGGTCGGGATGCTATCGCTAAATCCAACCCTGTAATTAAGGCTGATAAGCTTGACAAATTCTAG 519 0.4412 MDSHDETGCQTPELPILCVNNCGFFGRAATMNMCSKCYKDTLLMQEQEKLAAASVENLVSGGSTHNEKHVVSDGAVDVQVENAEVKTVGAEISGDSSSSENLEIKVKTGPSRCATCRKRVGLTGFTCKCGNLFCAMHRYSDKHDCPFDYQSVGRDAIAKSNPVIKADKLDKF* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3729 172 Pfam AN1-like Zinc finger 113 150 IPR000058 GO:0008270
Mal1g3729 172 Pfam A20-like zinc finger 16 39 IPR002653 GO:0003677|GO:0008270
Mal1g3729 172 Gene3D - 3 60 - -
Mal1g3729 172 ProSiteProfiles Zinc finger A20-type profile. 12 46 IPR002653 GO:0003677|GO:0008270
Mal1g3729 172 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 171 - -
Mal1g3729 172 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8 1 171 - -
Mal1g3729 172 SMART A20_3 15 39 IPR002653 GO:0003677|GO:0008270
Mal1g3729 172 ProSiteProfiles Zinc finger AN1-type profile. 107 153 IPR000058 GO:0008270
Mal1g3729 172 SUPERFAMILY AN1-like Zinc finger 103 167 IPR035896 -
Mal1g3729 172 Gene3D - 89 168 IPR035896 -
Mal1g3729 172 SMART AN1_Zf_4 113 150 IPR000058 GO:0008270
Mal1g3729 172 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 17 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3729 Mal-Chr1 72138980 72139498 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3729 5 172 C2H2 Transcription Factor Family AT3G52800 44.379 1.56e-40 133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3729 1 72138980 72139498 Mal1g3729 1 72138980 72139498 ECH
Mal1g3729 1 72138980 72139498 Mal7g2355 7 82164564 82165085 ECH