Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3728 ATGGCTCTCAACTCTTCTTCAAATAAGGATTTGACACCCACGGATGATGAACTTCTACAACCATTCCTCTACAACAAAATTCATAACATACCTTTGCCCAATGATATCAACATTCTTGAATACGATTTGTTCGACACCGAAAAAAATCCTTGGGAGATTTGGGAAGAGTTTGGAGATTTACACTCATATTGTGAAAAAGACCTATATTTCTTCACTACCTTAAAAAAGAAATCGGCCACTAGCGCACACTTAAATCGCTCTATTGGAATTGGTACATGGGAAGGTAAAGAGACCGGAGAAATTATAGTCGCCAATGACAAGCAAAAACTCTTAGGTTTGAAAAAATATTTTCGCTTTGAGAAGAGTAACACTTACCATGATGGTGGATGGATTTTGCATGAATATAGCCTCCACAAATCTTTGATAAGCAATCCTTCGGCCAACAATTATGTTCTATGCAGATTTAGAAAGAATTTCACTGCCTTACCCAGAAAAAATACGGGAACCAAAAATATTGTTCCTGGACGTGCGGCAACAACCACATCTGAGAACAATAATGTTTTGTTGGGAGAAAATATTGACCAAATTCCAAGAAATCAACTTAACAATTCGAATAACAAGAACGAAGCGGTTAAAACAACTAATGAAACAGGGTGCGCAATTCACAAAGAAGATTATAGCAAATGCATTTTGAACAAAGAAGATGACAGTTATATCTATATGGACATGGAAAATGGTGACCTTATCATGAGCAAAGAAGATGGTGATGGCGTTATGAACAAAGAAGAAAAAGACGAAGAAGAAGAAGATGAAGAAGAAGAAGATAGTGATCTCCATATGACTTGGCTTTTGTCAATGCAGCTGAGGGAGAAGAATGAGGGATGCTTGATCGAAGATGAAGATGTTCAAATGCTTCCCAATAATTTTTATAAAGACTTATTGTCGGAAAATTTTGATATTAAATAA 966 0.3602 MALNSSSNKDLTPTDDELLQPFLYNKIHNIPLPNDINILEYDLFDTEKNPWEIWEEFGDLHSYCEKDLYFFTTLKKKSATSAHLNRSIGIGTWEGKETGEIIVANDKQKLLGLKKYFRFEKSNTYHDGGWILHEYSLHKSLISNPSANNYVLCRFRKNFTALPRKNTGTKNIVPGRAATTTSENNNVLLGENIDQIPRNQLNNSNNKNEAVKTTNETGCAIHKEDYSKCILNKEDDSYIYMDMENGDLIMSKEDGDGVMNKEEKDEEEEDEEEEDSDLHMTWLLSMQLREKNEGCLIEDEDVQMLPNNFYKDLLSENFDIK* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3728 321 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 12 278 - -
Mal1g3728 321 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 278 - -
Mal1g3728 321 SUPERFAMILY NAC domain 12 156 IPR036093 GO:0003677|GO:0006355
Mal1g3728 321 MobiDBLite consensus disorder prediction 250 278 - -
Mal1g3728 321 Pfam No apical meristem (NAM) protein 12 137 IPR003441 GO:0003677|GO:0006355
Mal1g3728 321 MobiDBLite consensus disorder prediction 260 277 - -
Mal1g3728 321 Gene3D NAC domain 14 160 IPR036093 GO:0003677|GO:0006355
Mal1g3728 321 ProSiteProfiles NAC domain profile. 5 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3728 Mal-Chr1 71935063 71937846 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3728 13 266 NAC Transcription Factor Family AT5G62380 27.599 8.50e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal1g3728 NAM 2.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3728 - - mtr:MTR_1g045470 311.612