Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3716 ATGGAACAAACCACACTCGAATCCATTCAATTCAACGAAGAAATTCAAGGAATCATGGCTCCGGCGACGGAAACTGCGAACTCTTTCACCGCACTTCTCGAACTACCACCGACGCAGGTCGTTGAGCTTCTCCACTCGTCGGCGATCACCGGAAAACCGCCGAAACCCTATCCTCTGACTTCCGCCACCGGTAATTTGACTTTCCCTTCCAACGCCGCGTTGGTTGAACGCGCCGCCAGATTCTCCGTCTTCGCCGGAGAGAACGGCTTGCCGGAGGTTAAGGATGAGTTACCGGAGATGGAGGAAGGTGGATGTGTCTCTGATCCAACGGTTGAGAACAAAAACTCCAAGAGTGCGAAGAGGAAAGAACGAGAGAAGAAGGTGAAATTGTCGTCTAAGAAAAGCAAAAGCATCTCCGCCGACGAGAATTCCGGCAACGGCGAGGAGCAGCCGTACGTTCACGTTCGAGTTCGTCGCGGTCAAGCCACTGATAGTCATAGCTTAGCAGAAAGGGCGAGGAGAGAGAAGATAAATGCTCGAATGAAACTGTTGCAAGAGCTGGTCCCCGGTTGCAACAAGATATCAGGAACAGCATTGGTTTTGGATAAAATCATCAACCATGTGCAATCTCTACAGCATGAAGTGGAGATTTTATCAATGAAACTAGCAGCAGTTAACCCAATAATTGATTTCAACCTTGACAGCATATTGGCTACAGAAGGAATGTCTCTCATGGACAGTAACTTCCCTAACGCAGTTTCACCCGCCGTGTGGCCTGAAATCCCACACAATGTTAACAGACAGCAATTTCAGCAACCGTGGCAATCTGATGCATTCCACCAACCACTTTGGGGGAGAGACGAAAACAACGCTAATTTCATGACCCCAGAAAACTCACTTTTGAGTTATGACTCATCCGCAAATTCAGTATCTCTGCACACAAATCAAATGAAGATGGAGCTATGA 966 0.4814 MEQTTLESIQFNEEIQGIMAPATETANSFTALLELPPTQVVELLHSSAITGKPPKPYPLTSATGNLTFPSNAALVERAARFSVFAGENGLPEVKDELPEMEEGGCVSDPTVENKNSKSAKRKEREKKVKLSSKKSKSISADENSGNGEEQPYVHVRVRRGQATDSHSLAERARREKINARMKLLQELVPGCNKISGTALVLDKIINHVQSLQHEVEILSMKLAAVNPIIDFNLDSILATEGMSLMDSNFPNAVSPAVWPEIPHNVNRQQFQQPWQSDAFHQPLWGRDENNANFMTPENSLLSYDSSANSVSLHTNQMKMEL* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3716 321 MobiDBLite consensus disorder prediction 92 152 - -
Mal1g3716 321 Pfam Helix-loop-helix DNA-binding domain 165 212 IPR011598 GO:0046983
Mal1g3716 321 PANTHER TRANSCRIPTION FACTOR BHLH FAMILY-RELATED 1 321 - -
Mal1g3716 321 Gene3D - 158 229 IPR036638 GO:0046983
Mal1g3716 321 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 321 IPR024097 GO:0006355
Mal1g3716 321 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 159 230 IPR036638 GO:0046983
Mal1g3716 321 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 161 211 IPR011598 GO:0046983
Mal1g3716 321 CDD bHLH_AtBPE_like 151 236 - -
Mal1g3716 321 SMART finulus 167 217 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3716 Mal-Chr1 71275766 71280347 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3716 2 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G57800 50.136 1.11e-92 279
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mal1g3716 HLH 3.9e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3716 - - aprc:113872810 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3716 1 71275766 71280347 Mal1g3716 1 71275766 71280347 ECH
Mal3g3571 3 112912356 112918129 Mal1g3716 1 71275766 71280347 PCT