Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3706 ATGGCATCTTCAAATTGGAAGCCTAAGCTTGGAATGGGATTTGATAATATGGAGGAGGCCTATCAATTTTGGCATGCTTATAGTGTACGTGTGGGCTTCGGAGTTAGAATACGTTTTACAAACAAGAAGAAGGAAGACGGTAGTATATCCTCATGTAGGTTGGTATGTTGGAAGGAAGGTTCAGTCATTTTTGGTGCAGCACTAATGTATGATGAGACAATTCCATCATTTAAATGGTTGTTTGATACATTCTTACAAGCACACAACAACAAAAAACCAAAGACGATCTTCACTGACCAAGATCAAGCAATGTCTAGTGCACTTGCACAAGTGATGCCTGAGACTCGCCATGGTTTATGCACATGGCACTTGTTGCAAAATGGAATTAAACATCTTGGGAACTTGATGAAGGGAGGAACTTTTTTCCTTAGAGATTTCAAAAAATGTATGTATGATATTGACACTGAAGCGGATTTTGAGAAACTTTGGTTTGATATGATCAATGAATATGATGTTCATGATAAAACTTGGATCATATCAGAAGTGTTAACACTTGGCATGCGAAGTACACAAGTTAGTGAAAGTTTGAATGCTCACTTCAAATCTGGTATGAAACCGAATGTGGATATCCTACAATTCTTCAAACATTTCGAAACAGTTGTTGAGGAGAAGAGAGCAAAAGAATTGAGTTCTGAGTATACATCTTCACATAAGCTTCCAAGGTTAGCATATGAAACTTCACCAATACTAATCCAAATGGGAAAAATATACACACACAAGTTATTCTTAGCTTTATCTATATTGGAGAGACATGAATCTGACTCTCTTTGTGAATATGTCATCACTATGATGAACCATGAAAGATCTTGGAGAGTGTCATTTAATCGTGCTTCAACTTCCATTACTTGTAGTTGTAGGAAGTTTGAAACATTTGGCATACTTTGTTCACATGCATTAAAAGTGTTTGAATTTAATGATGTTAAGGTGATTCCGGAAAAGTATATTTTAAGAAGGTGGACAAGAGATGCTCGTTGTGGCATTGTGCAAGATTTTAGGGGGAAGGAGGTTGTAGGAGATCCTAAGTTGTCTAGAAATAGAATGTTTAGACAAGTTGTCTCTAAGTTCATTAGAGCAGCAACTGAAGCATCGCCTAGTGAAGAATGTCTCAAGCTTGTTGATAATAGTGTAGATTACATGTTCAAGAAAATAATGGAACTTCGTGCACAAGCTGTAGATAATGACGGTGATAATAGTGATCGTCCGACCTTATTGAGTTCTGATGCTATGCAAGCAAAGGGGTTCAAGAAACGAGACGAATCAAAGCGAGCTAAGAGATATAAAAGTTGCATTGAACTCCAGAAAAAGCGTGCTCCATCCAAACGTTCACAGGCTAAAGAATTAACAACCCATATGGTCGATGGAGTATCTTGTTCTGCGCCTCCAACTTATGAGCTCCCACAAGCACGTGAAGATCAAGTCAGTTACACAGCCATGATGATGGACATCGAAAGAAATGGAGCTGATTTTGCAGAATCACCTTCCATGATCACTTACATATATGATATAAATGGTTCAAACATTTTCTCAATTGTAAAATTAAGCAAAAAGGCTTATTGA 1617 0.3741 MASSNWKPKLGMGFDNMEEAYQFWHAYSVRVGFGVRIRFTNKKKEDGSISSCRLVCWKEGSVIFGAALMYDETIPSFKWLFDTFLQAHNNKKPKTIFTDQDQAMSSALAQVMPETRHGLCTWHLLQNGIKHLGNLMKGGTFFLRDFKKCMYDIDTEADFEKLWFDMINEYDVHDKTWIISEVLTLGMRSTQVSESLNAHFKSGMKPNVDILQFFKHFETVVEEKRAKELSSEYTSSHKLPRLAYETSPILIQMGKIYTHKLFLALSILERHESDSLCEYVITMMNHERSWRVSFNRASTSITCSCRKFETFGILCSHALKVFEFNDVKVIPEKYILRRWTRDARCGIVQDFRGKEVVGDPKLSRNRMFRQVVSKFIRAATEASPSEECLKLVDNSVDYMFKKIMELRAQAVDNDGDNSDRPTLLSSDAMQAKGFKKRDESKRAKRYKSCIELQKKRAPSKRSQAKELTTHMVDGVSCSAPPTYELPQAREDQVSYTAMMMDIERNGADFAESPSMITYIYDINGSNIFSIVKLSKKAY* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3706 538 MobiDBLite consensus disorder prediction 412 440 - -
Mal1g3706 538 Pfam SWIM zinc finger 301 322 IPR007527 GO:0008270
Mal1g3706 538 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 4 41 IPR031052 GO:0006355
Mal1g3706 538 ProSiteProfiles Zinc finger SWIM-type profile. 290 326 IPR007527 GO:0008270
Mal1g3706 538 PANTHER OS01G0607050 PROTEIN 61 403 - -
Mal1g3706 538 PANTHER OS01G0607050 PROTEIN 4 41 - -
Mal1g3706 538 Pfam MULE transposase domain 60 127 IPR018289 -
Mal1g3706 538 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 403 IPR031052 GO:0006355
Mal1g3706 538 SMART 26again6 301 328 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3706 Mal-Chr1 71049331 71051776 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g3706 MULE 5.6e-18 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3706 - - cam:101507984 623.239