Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3682 ATGGAGTTGGATGATAATGAAGTCGATCCACCCTCACCGTCAAATGATCCAGAAAATACGTTGGTGGAATGGATTCCTGCGTGCGATGATGAACTCAAACCTGTGATTGGTAAGGTGTTTGATACTTTAATAGAAGGAGCTGATTTCTATAAAACTTATGCTCATGCCGGTGGTTTTAGTGTGCGTAATTCGTCTGAAACAAAAGATAATGTTGGTGTCAAATGGAAATATTTTCTTTGCTCAAAAGAGGGTCTTAAAGAAGAAAAAAAGATAGAATCACCTCAATTGCTTATTACTGAAAATAGTGTCTCTAAAAGTAGAAAAAGAAAAGTGACACGGGAGGGATGTAACGCAAGAATTGTTTTTAGGAGAACTACTGATGGTCATTCACATGGGCTAGTAACACCTAGAAAGAAGCAATTCTTAAGATCAGCAAGGAGTGTAAACGGTGTTCATAAGAATATATTATTTTCCTGCAATAAAGCTAACGTGGGGACTTCAAAAAGTTATCAAATAATAAAGGATCAGGTTGGAAGTTATGAAAATATAGGATGCACACAAAGAGATTTGCAAAATTATTCAAGAAATTTGAAAGAATTGATCAAAGACTCTGATGTAGACATGTTTATCGATAATTTTAGAAGAAAACATGAGATAAACCCTTCATTTTTCTATGATTATGAAGCTGATGATGAGGGGAAGCTGAAGTATGTGTTTTGGGCTGATGGAATTTGTCGAAAAAATTACTCTTTGTTTGGAGACGTGGTTTCATTTGACAAAACATACCGTACAAACAAGTATTTTATGATTTTTGCACCACTCATTGGCATAAATAATCACCGTCAAAGCATAACCTTTGGGGCAGCACTTTTAAAAAATGAAAAAGAAGAGTCGTTTGTTTGGTTGTTTAAGGCATTTTTGAAAGCAACGAGGGGACATAAATCTGTTATGATAATAATAGATCAAGACCAGGGTATGAAGAATGCAGTGAAAGAGGTTCTTAATGGGTCTTCTCATAGATTTTGCATGTGGCATATTCTAAAAAAACTTTCAGAAAAAGTGGGTAGTTCCTTGAATGAGAATAAAACATTTAATAATCGTCTGAACTCATGTATTTGGAACTCAGAGTCCTCGGAAGAATTTGAATTAGAATGGAATAATATTATTAGTGATTACAACTTGGAAAAAAATGGATGGCTTTCTACAATGTATGATCTAAGAACCATGTGGATACCAGCTTATTTTAAAGATACATTTATGGCTGGAATTTTGAGAACGACCTCAAGATCGGAGAGTGAAAATTCATTCTTTGGCAATTACTTGAATAAGAACCTAACTTTAGTGGAATTTTGGATGCGATTTGATTCTGCTTTAGAAGCACAGAGACACAAAGAACTTCATGCAGATAATAATACACTTCATTCTAATCCCGAACTGAAGATGCACAAGGATTTAGAGAAACATGGTAGAGAGGTTTATACTCATGAAATTTTTTACATATTTCAGAATGAGTTGTGGAGTGCATGTGTAGATTGTGGAATTGAAGGAACGAAAGAGGAAGGTGAGAATATACTATTTTCTGTACTTGATAATGTTGTGGTCAATGGCACTAAAGTGAGAAAACATAGAGAAGTTGTTTATTGTCTTTCTAATAATATTGCACGTTGTTCATGCAAAATGTTTGAATCACAAGGCATGCCATGTCGACATATTCTTTTTGTATTAAAGGGGAAAGGTTTTACTGAAATTCCAAGTCATTACATTGTCAATAGATGGACGAAAATGGCAACAAGTAGACCAGCATGTTCTAAATTTGAAAGTGAGAGGACATTAGTCTCAAAAGCATGGTCACAATTGTTTAAATGCATGCATATTGCTGGTACAAGTAAAGAGAAATTGCTCCTCATTTACAATGAGGGTTGTAGTATTGAATCAAAAATGTCTAAAATGAAGAGTGATGTATCAAGACCCTTAGATGAATTGGAGGCTTTTATTGGTTCTAGTTGTGGAAAACGCATCAAAGGGGGGAAAGAGAAGGCAATGAAACAACAACAAAAGAGAACAAGGCTTTGTAAAGCTTGCAAGCAATATGCATCCCATGATAGTCGCAATTGTCCCACAAAATCCTCTTCATAG 2136 0.3493 MELDDNEVDPPSPSNDPENTLVEWIPACDDELKPVIGKVFDTLIEGADFYKTYAHAGGFSVRNSSETKDNVGVKWKYFLCSKEGLKEEKKIESPQLLITENSVSKSRKRKVTREGCNARIVFRRTTDGHSHGLVTPRKKQFLRSARSVNGVHKNILFSCNKANVGTSKSYQIIKDQVGSYENIGCTQRDLQNYSRNLKELIKDSDVDMFIDNFRRKHEINPSFFYDYEADDEGKLKYVFWADGICRKNYSLFGDVVSFDKTYRTNKYFMIFAPLIGINNHRQSITFGAALLKNEKEESFVWLFKAFLKATRGHKSVMIIIDQDQGMKNAVKEVLNGSSHRFCMWHILKKLSEKVGSSLNENKTFNNRLNSCIWNSESSEEFELEWNNIISDYNLEKNGWLSTMYDLRTMWIPAYFKDTFMAGILRTTSRSESENSFFGNYLNKNLTLVEFWMRFDSALEAQRHKELHADNNTLHSNPELKMHKDLEKHGREVYTHEIFYIFQNELWSACVDCGIEGTKEEGENILFSVLDNVVVNGTKVRKHREVVYCLSNNIARCSCKMFESQGMPCRHILFVLKGKGFTEIPSHYIVNRWTKMATSRPACSKFESERTLVSKAWSQLFKCMHIAGTSKEKLLLIYNEGCSIESKMSKMKSDVSRPLDELEAFIGSSCGKRIKGGKEKAMKQQQKRTRLCKACKQYASHDSRNCPTKSSS* 712
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3682 711 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 127 598 - -
Mal1g3682 711 PANTHER PROTEIN FAR1-RELATED SEQUENCE 5-LIKE ISOFORM X1 26 128 - -
Mal1g3682 711 SMART 26again6 554 581 IPR006564 GO:0008270
Mal1g3682 711 MobiDBLite consensus disorder prediction 1 20 - -
Mal1g3682 711 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 127 598 IPR031052 GO:0006355
Mal1g3682 711 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 26 128 IPR031052 GO:0006355
Mal1g3682 711 Pfam SWIM zinc finger 550 575 IPR007527 GO:0008270
Mal1g3682 711 Coils Coil 183 203 - -
Mal1g3682 711 ProSiteProfiles Zinc finger SWIM-type profile. 547 579 IPR007527 GO:0008270
Mal1g3682 711 Pfam MULE transposase domain 255 349 IPR018289 -
Mal1g3682 711 Pfam FAR1 DNA-binding domain 48 129 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3682 Mal-Chr1 70212758 70215004 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mal1g3682 MULE 1.4e-26 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3682 - - soe:110798711 710.679