Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3680 ATGGGGTTTTCTTTGGCTTTTGAAGAAGCAAAACAACAAGAGCAAATAGATGCAAGGTTTTTAGGTTCCAATAACAATTCTATGATCATGGCTTCCAAAAACTCAACATCATCTCAACTTGAATCTCTTCAACAAGAGCAAAACCATCACAATCTTCATCATCATCAGCAACAACAATATCAAAATCAACATCATCCTCATCATATGCATGACCATCAAATTTCTTTTGGAATGATGCCATCTTCATCTTCATCCTCTATGCCTAGCAATTACTTAAGCAAAGATTCAAGTGCTTATGATTTAGGTGAATTGGATCAAGCATTTTTTTTGTATCTAGATGGACAAGCACAAGCTGATCCTTCTAGTGTTCAAGATCAAAGACAGAATTCATCATCATCAGGAATGAAGCCACCACCAACTCTTAACATTTTCCCATCTCAACCAATGCATGTATCACCACCACCACTACCACCATCCAATTCAAAGGCTAGCATGGGATTAACCTCTCCACAGACAAGTGGTTCCAAAAAACAATCTCAACCGTCCATGGAGTTGGCAAACCAACGAAATGAAAACCCTTCTGCACCTGCACCACCCAAACCTGTCAAGAGAGAGAACAATCGCAAGGGTACAACTTCAAGTTCTGAACATGAAGGACCAAAAACACCAGATCCTAAGACTCTGAGAAGACTTGCTCAGAATAGAGAGGCAGCAAGGAAAAGCAGGCTTAGGAAAAAGGCTTATGTTCAGCAGCTTGAAACAAGTAGGATTAAGCTTAATCAGCTTGAACAAGAGTTACAGCGTGCTAGGGCTCAAGGCGTGTTAATGGGTGGAGGTGCACTTATGGGAGGAGACCAAGGAATTCCAATTTCTATGAATAGCATTAGCTCAGAGGCTGCAATGTTTGATGTGGAATATGGGAGGTGGTTAGAGGAACATCACAAGCTAGTGTGTGAGCTAAGAGCTGCAGTAGATGAACACTTACATGAAAATGAGCTTAGGTTATATGTGGAAAATTGTTTGGCTCACTATGATCAAGTAATCAACCTCAAAAACATTCTAGCTAGAACAGATGTTTTCCATCTTGTTTTTGGAATGTGGAAAAGTCCAGCTGAACGTTGCTTCATGTGGATTGGTGGATTCAGACCATCTGAACTCATTAAGATAATTGTAAGTCAAATTGAGCCTCTTACGGAGCATCAAATACTTGGTATATGTGGATTGCAACAATCAACACAAGAAGCAGAAGAGGCACTTTCCCAAGGGCTTGATGCACTAAACCAATCTCTTTCAGAGACTATAACTTCTGACTCTTTGAGCAATCCTCCCAATATGGCTAACTACATGGGACAAATGGCTCTTGCCATGAATAAGCTCTCCACTCTTGAAAGTTTTGTGAGACAGGCAGATAATCTGAGGCACCAAACAGTTCATCGTCTTCATCAGCTGCTAACAACTCGTCAAGCTGCAAGGTGTTTGGTTGCAATGTCTGAATACTTTCATCGTCTTCGAGCATTGAGTTCTCTCTGGTTAACCCGTCCTCGCCAAGAATAG 1554 0.4099 MGFSLAFEEAKQQEQIDARFLGSNNNSMIMASKNSTSSQLESLQQEQNHHNLHHHQQQQYQNQHHPHHMHDHQISFGMMPSSSSSSMPSNYLSKDSSAYDLGELDQAFFLYLDGQAQADPSSVQDQRQNSSSSGMKPPPTLNIFPSQPMHVSPPPLPPSNSKASMGLTSPQTSGSKKQSQPSMELANQRNENPSAPAPPKPVKRENNRKGTTSSSEHEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLETSRIKLNQLEQELQRARAQGVLMGGGALMGGDQGIPISMNSISSEAAMFDVEYGRWLEEHHKLVCELRAAVDEHLHENELRLYVENCLAHYDQVINLKNILARTDVFHLVFGMWKSPAERCFMWIGGFRPSELIKIIVSQIEPLTEHQILGICGLQQSTQEAEEALSQGLDALNQSLSETITSDSLSNPPNMANYMGQMALAMNKLSTLESFVRQADNLRHQTVHRLHQLLTTRQAARCLVAMSEYFHRLRALSSLWLTRPRQE* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3680 517 MobiDBLite consensus disorder prediction 76 92 - -
Mal1g3680 517 SUPERFAMILY Leucine zipper domain 226 268 IPR046347 GO:0003700|GO:0006355
Mal1g3680 517 MobiDBLite consensus disorder prediction 141 160 - -
Mal1g3680 517 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 224 268 IPR004827 GO:0003700|GO:0006355
Mal1g3680 517 PANTHER TRANSCRIPTION FACTOR TGA9 110 516 - -
Mal1g3680 517 Coils Coil 245 272 - -
Mal1g3680 517 Pfam Seed dormancy control 317 392 IPR025422 GO:0006351|GO:0043565
Mal1g3680 517 MobiDBLite consensus disorder prediction 161 193 - -
Mal1g3680 517 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 229 244 IPR004827 GO:0003700|GO:0006355
Mal1g3680 517 SMART brlzneu 222 275 IPR004827 GO:0003700|GO:0006355
Mal1g3680 517 MobiDBLite consensus disorder prediction 119 140 - -
Mal1g3680 517 MobiDBLite consensus disorder prediction 119 229 - -
Mal1g3680 517 ProSiteProfiles DOG1 domain profile. 299 513 IPR025422 GO:0006351|GO:0043565
Mal1g3680 517 MobiDBLite consensus disorder prediction 28 92 - -
Mal1g3680 517 Pfam bZIP transcription factor 226 264 IPR004827 GO:0003700|GO:0006355
Mal1g3680 517 MobiDBLite consensus disorder prediction 28 46 - -
Mal1g3680 517 Gene3D - 225 274 - -
Mal1g3680 517 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 110 516 - -
Mal1g3680 517 MobiDBLite consensus disorder prediction 202 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3680 Mal-Chr1 70041155 70050500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3680 90 517 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 62.896 0.0 546
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Mal1g3680 DOG1 9.1e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3680 K14431 - gmx:100800059 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3680 1 70041155 70050500 Mal1g3680 1 70041155 70050500 ECH
Mal3g3587 3 113093140 113099070 Mal1g3680 1 70041155 70050500 PCT