Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3669 ATGATGAACAATTCTTGTGCTTCTTCTTCATCTCCCTCTCATCATTTTATTCATCATCATAAACCAAAAAGCAACGTTGTTGATCTTGAAAATGAGAAACAACATCAAGATGCAAGACTTCATAAATGTGATTTGTGTGCCAAAGAATTCACTACTGGTAACGCCCTCGGCGGGCACAAATCATTCCATCGTGCCAACGACTTTCTTCAACCCAAAATCAAGCAACACAAACATGCTCATGGTATTAAGATCGGTAGCTTAAAGATCAAGCACTCATGTGTTCTTTGCAAAAAGGCTTTTTCGTCGGTCAATGCTTTGAATGGACACATGAAATGGCACAGTCCATATGGTTCAAAGAAGGGTAGTAAGAATTATGATCAAGATCCGTTTCCACCCTTTGATTTGACTAAGTTTTTGCCACCAATAATGTACAAGACCAAGAAACGTAGCAGGAGATTGAGAGATGTTATTGATGTTGAAGCTGCTAACGTTGCTGAAATAATGTTGGATTTCTCCCGGCAATCATCTGCAGATCTTGATGTGAATCATCGTGACAGTAAAACGATGAAACTTTGCAGAAATGTGGGTGAGAATGAGAAGATCGAAGAACAAGGTGGTGTGCTGCTAACAAGAGGAGAAAATAATGAAAAGAACAGGTTGGTGGTGAGATTAAAGATTCCGAAAGGCCTTCTTTTCCAAACATCACAAGCTTGTCAACAACCTGCCTCCAATGATGATAACAACAACACTGATGAAGGTGATGAAACAGATGGGGAATCAAATCATGAATTAGGGCCAAATGTTTTTCGGGATTTTGATTTGAATGAGCTACCAGCGGATGATGTTGCAGATGAAACCACCGATTAG 867 0.3968 MMNNSCASSSSPSHHFIHHHKPKSNVVDLENEKQHQDARLHKCDLCAKEFTTGNALGGHKSFHRANDFLQPKIKQHKHAHGIKIGSLKIKHSCVLCKKAFSSVNALNGHMKWHSPYGSKKGSKNYDQDPFPPFDLTKFLPPIMYKTKKRSRRLRDVIDVEAANVAEIMLDFSRQSSADLDVNHRDSKTMKLCRNVGENEKIEEQGGVLLTRGENNEKNRLVVRLKIPKGLLFQTSQACQQPASNDDNNNTDEGDETDGESNHELGPNVFRDFDLNELPADDVADETTD* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3669 288 MobiDBLite consensus disorder prediction 235 288 - -
Mal1g3669 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 41 68 IPR013087 -
Mal1g3669 288 SUPERFAMILY beta-beta-alpha zinc fingers 90 114 IPR036236 -
Mal1g3669 288 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 16 282 IPR044653 GO:0003700
Mal1g3669 288 MobiDBLite consensus disorder prediction 1 25 - -
Mal1g3669 288 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 114 IPR013087 -
Mal1g3669 288 ProSitePatterns Zinc finger C2H2 type domain signature. 43 63 IPR013087 -
Mal1g3669 288 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Mal1g3669 288 Pfam C2H2-type zinc finger 91 113 - -
Mal1g3669 288 Pfam C2H2-type zinc finger 41 65 - -
Mal1g3669 288 SMART c2h2final6 41 63 IPR013087 -
Mal1g3669 288 SMART c2h2final6 91 113 IPR013087 -
Mal1g3669 288 Gene3D Classic Zinc Finger 41 113 - -
Mal1g3669 288 SUPERFAMILY beta-beta-alpha zinc fingers 38 67 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3669 Mal-Chr1 69623464 69624330 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3669 28 121 C2H2 Transcription Factor Family AT2G45120 32.632 3.13e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g3669 zf-C2H2_6 3.9e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3669 - - mtr:MTR_1g053530 296.975