Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3667 ATGACTCTAGAATGTCCAATTTATCATCCATCAGAACAAGAGTTCGAGCATCCTTTAGTTTATCTTCAGAAAATTGCTCCTGAGGCTTCTAAATATGGTATTTGCAAGATTGTTTCTCCAATTGCTGCCTCTAATCATGCTTCTTTTGTCTTAATGAAAGAGAAAAAGGATTTTAAGTTTGAAACAATTGTACAGCCTCTTAGGCTTTTCAAATCAAATGAGAAGGATATGATAACTTTTTCTAAGAGAGGAAGAAAATATACATATCATGAGTTTGAAGCTCTAGCAAACAAGGCGTTTTCCAATAGATTTCGCAGTAAAGAAGATACCTCTTCTTTAGATATCGAAAAAGCGTTCTGGCACGAAATGATACTTGGAGAGAAAGGAACAGTTGAGTATGGAGTAAACATTGAGGGAAGTGCCTTTTCAAGTGATCCTGAAGATAAGCTTGGAACAAGCAACTTTAATTTGAAGAATTTGGCGCAGCTGCCGCAGTCTCCGTTGCGTTTAGTTGACAGGGAAATTCCAGGAATAACTGATCCTATGCTTTACATTGGGATGCTATTCAGTATGTTTGCATGGCATGTAGAAGATCACTATTTGTACAGCATAAATTATCATCACTCAGGTGCAAATAAAACTTGGTATGGTGTGCCTAGCTCTGCAGCCTCTAAATTTGAAAAGACTGTCTTGGATCATTTGTATTGCAACAAAGTGTTAACAGAACATGGAGAGAATGGTGCTTTCCAATTTCTTGCACAAAAAACAACCATGTTCTCTCCTGATGTCCTTTCAGAACATAATGTGCCGGTTTACACAACGGTGCAGAAGCCAGGAGAATTTGTTATCACATTTCCTAAATCATATCATGCTGGATTTAGTCATGGTTTTAACTGTGGAGAAGCTGTAAACTTTGCTGTTGGAGATTGGTTTCCACTTGGGGCTGAAGCAAGCAAACGTTATTCACATCTCAAAGTGCTACCTATAATTCCATATGAGGAACTTCTTTGTAAAGAAGCAATGCTTATATACAACTCCTCAAAAGCTAGAGGATACAAAATCAAACCTGAAGACACGGCATCTTATCGAGCTATTGTACTGTCTTTCTTGCATCTTATTCAATTTTATAAGACATCGCTATCGCGGTTGGACAGTTCGAGGAAGCTGTCAAGCTCTTCAAATTCTTCATTAGGTTCTGTGACATGTAGCCTCTGCTATAGGGATTGTTATATAGCTTTCTTGTTGTGCAAGAAATGCTATTCCAATCCAATTTGCCTTTTCCATGACATTGTGCCACAAACTTGCTTATGTGGGAGAAATCATACTGTTTTTAAGAGGAATGACATGTTGGAACTCGAAGAAGCTGCCAAAAGTTTTCAACAGCAAAAAGAATGCATCGACGTGTTATCTTCAACAAATATATTCTCCTATAACAAAAATGAATGTATCAAAGAACTCAAGAATAATAATTGGCATGAGGAAAAAAGTGCTAGAAGAGCTGTTAACTCACTAGGCGCAGCATCTAAACTGAAAACAAGAGTTGCGAACAACATCAAGCACAATGTTGAAAGTAATCAAAAGAAGACAAAGAATCATTGTAGAAACAACGCGCCTCCATCAGTGTTGAGTACCAAAAGACCAAGAATCCTTTATGACATGATAAAACATGAATCATCGTAG 1680 0.3744 MTLECPIYHPSEQEFEHPLVYLQKIAPEASKYGICKIVSPIAASNHASFVLMKEKKDFKFETIVQPLRLFKSNEKDMITFSKRGRKYTYHEFEALANKAFSNRFRSKEDTSSLDIEKAFWHEMILGEKGTVEYGVNIEGSAFSSDPEDKLGTSNFNLKNLAQLPQSPLRLVDREIPGITDPMLYIGMLFSMFAWHVEDHYLYSINYHHSGANKTWYGVPSSAASKFEKTVLDHLYCNKVLTEHGENGAFQFLAQKTTMFSPDVLSEHNVPVYTTVQKPGEFVITFPKSYHAGFSHGFNCGEAVNFAVGDWFPLGAEASKRYSHLKVLPIIPYEELLCKEAMLIYNSSKARGYKIKPEDTASYRAIVLSFLHLIQFYKTSLSRLDSSRKLSSSSNSSLGSVTCSLCYRDCYIAFLLCKKCYSNPICLFHDIVPQTCLCGRNHTVFKRNDMLELEEAAKSFQQQKECIDVLSSTNIFSYNKNECIKELKNNNWHEEKSARRAVNSLGAASKLKTRVANNIKHNVESNQKKTKNHCRNNAPPSVLSTKRPRILYDMIKHESS* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3667 559 Pfam jmjN domain 6 38 IPR003349 -
Mal1g3667 559 PANTHER LYSINE-SPECIFIC DEMETHYLASE 3 558 - -
Mal1g3667 559 MobiDBLite consensus disorder prediction 523 542 - -
Mal1g3667 559 Gene3D Cupin 5 364 - -
Mal1g3667 559 SMART cupin_9 152 322 IPR003347 -
Mal1g3667 559 SUPERFAMILY Clavaminate synthase-like 83 338 - -
Mal1g3667 559 Pfam JmjC domain, hydroxylase 182 305 IPR003347 -
Mal1g3667 559 PANTHER TRANSCRIPTION FACTOR JUMONJI FAMILY PROTEIN 3 558 - -
Mal1g3667 559 Pfam C5HC2 zinc finger 402 454 IPR004198 -
Mal1g3667 559 SMART JmjN_1 4 45 IPR003349 -
Mal1g3667 559 ProSiteProfiles JmjC domain profile. 152 322 IPR003347 -
Mal1g3667 559 ProSiteProfiles JmjN domain profile. 5 46 IPR003349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3667 Mal-Chr1 69521594 69524778 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3667 4 464 JUMONJI Transcription Factor Family AT2G34880 31.827 8.25e-63 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Mal1g3667 JmjC 5e-42 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3667 - - gmx:100809650 791.186