Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3660 ATGGCTCTCAATTCTTCTTCAAGCAAGGAGTTCATTTTCAAACTCACAGATCATGAACTTCTACGATTCCTCTACAACAAAATTCATAACAATTCTTTGCCCAATTATATCACCATTCTTGAATACGATTTGTTCGGCACCTTAAAGAATCCTTGGGAGATTTGGGAAGAGTTTGGAACTTCCAACTCAAATTGTGAAAAAGACTTATATTTCTTCACTACCTTGAAGAAGAAATCTGCCACTAGCTCATGCTTCGTTCGCACTATTGGAATTGGTACATGGGAAGGTGAAGACACCGGAAAAAATATAGTCGCCAAAGACAAGAACAAACTCCTCGGTGTGAAAAAATATTTTCGCTTTGAGAAGAGTAACACTAACCATGATGGTGAATGGATCTTGCACGAATATAGCCTCGACAAATCTTTAATCACCAATCCTTCGGCCAAGAACTATGTTCTATGCAGATTCATAAAGAATTGCATTCCCTTACCAAGAAAAAATACAAGAACCAAAAATATTGTTGCACAAGATGATAAAGAAAGAAAGACTATCGTTCCTGGATGTTCAGCAACCACCATATCCGGAAATAACACTTTGTTGACAGAATATATAATTTATGAAGAACCAAGAAATGAATCAAATGGTAATACAGAGTCTCATAATAAGGAAGAAGAAAAAAATGTGACAAATATTTGGCCAAAAGAGACAGTCATTCTTGGACCTGAAGCAGCCAACAAATTTGAGAACAATAATGTTTGGTTGGGCGAAAATAATGAGGCGGAAGAAGATGGCAATCAACCTGACGATTCGAATAATGAGGCTGAAGAAGATGGTGATCTTATCATGAGCAAAGAAAAAGATGGTGATGTTATTATGAACAAAGAAGAAAACGGTGATGCTAGTATGTCTTGGCCTGAGCTTTTCTCAAGGCAGCTGATGGATGCTAATGAAGGATGCTTGATCAAAGAGGAAGATGTTAAAATGATTTCCAATGAGTTTTATAAGGACTTATTGTTGGAAAATATTGATATAAATAAATAG 1041 0.3612 MALNSSSSKEFIFKLTDHELLRFLYNKIHNNSLPNYITILEYDLFGTLKNPWEIWEEFGTSNSNCEKDLYFFTTLKKKSATSSCFVRTIGIGTWEGEDTGKNIVAKDKNKLLGVKKYFRFEKSNTNHDGEWILHEYSLDKSLITNPSAKNYVLCRFIKNCIPLPRKNTRTKNIVAQDDKERKTIVPGCSATTISGNNTLLTEYIIYEEPRNESNGNTESHNKEEEKNVTNIWPKETVILGPEAANKFENNNVWLGENNEAEEDGNQPDDSNNEAEEDGDLIMSKEKDGDVIMNKEENGDASMSWPELFSRQLMDANEGCLIKEEDVKMISNEFYKDLLLENIDINK* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3660 346 MobiDBLite consensus disorder prediction 258 287 - -
Mal1g3660 346 ProSiteProfiles NAC domain profile. 7 159 IPR003441 GO:0003677|GO:0006355
Mal1g3660 346 MobiDBLite consensus disorder prediction 261 276 - -
Mal1g3660 346 Gene3D NAC domain 16 160 IPR036093 GO:0003677|GO:0006355
Mal1g3660 346 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 278 - -
Mal1g3660 346 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 11 278 - -
Mal1g3660 346 SUPERFAMILY NAC domain 12 157 IPR036093 GO:0003677|GO:0006355
Mal1g3660 346 Pfam No apical meristem (NAM) protein 10 138 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3660 Mal-Chr1 69001846 69004567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3660 11 158 NAC Transcription Factor Family AT5G13180 33.333 4.94e-14 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mal1g3660 NAM 1.7e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3660 - - mtr:MTR_1g045470 410.609