Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3591 ATGGCGGAACGAGCATCTCATAGAAATCCAATGGACATTGATTTGAATCTGGAACCAAATCCAGAGCAATTATCACACGCCATTGGTGCTATGAACTTGAATGATTCGATTCATCAACCTTATTATATAGTTAGTAATCCTCTTGATATTCATACTTGGGAAAATGTTTCCAATGAATTGGATCGATTTTTGTTTGTTTCTCGCCATCGAAGTGTTGGAAGGGCTGCTGAAGTACCACAACCACAACCAAGCCGTATCTCACTAAATGGGGTCGGCTATGCTGAAGTACCACAAGCTAGTGAAAGTAGCAATGTTGGTCTTGCATTGGATAAGAGCAAGACATTAGAGAAAAACGAGAACGATGAAAAGGGTTATGGCAGTGATGGAGGTTTCTATGATTGTAATATTTGTTTAGGTTTGGCTAAGGATCCTGTTGTGACTTGCTGCGGTCATTTGTTCTGTTGGCCATGCTTATATAGATGGTTGCATTTAAGATCATCTGAAACTAAAGAATGTCCTGTTTGCAAGGGAGAAGTTAAGGATAAGAATGTTATCCCTATATATGGTGGTGGGAATGATACCGAGGTTTATCACGAGGATTCGAGCTCTACTCTGCAAATCCCTCGCAGGCCTAATGCAAGGCGAAAGGATTCCAATACGAGGCAATCAAGACAGACGAGAGCGAGGAATCTAGGACGAGAATTTATGATACTTCAATAG 720 0.4097 MAERASHRNPMDIDLNLEPNPEQLSHAIGAMNLNDSIHQPYYIVSNPLDIHTWENVSNELDRFLFVSRHRSVGRAAEVPQPQPSRISLNGVGYAEVPQASESSNVGLALDKSKTLEKNENDEKGYGSDGGFYDCNICLGLAKDPVVTCCGHLFCWPCLYRWLHLRSSETKECPVCKGEVKDKNVIPIYGGGNDTEVYHEDSSSTLQIPRRPNARRKDSNTRQSRQTRARNLGREFMILQ* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3591 239 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 114 189 IPR013083 -
Mal1g3591 239 SUPERFAMILY RING/U-box 133 182 - -
Mal1g3591 239 SMART ring_2 134 175 IPR001841 -
Mal1g3591 239 ProSitePatterns Zinc finger RING-type signature. 149 158 IPR017907 -
Mal1g3591 239 Pfam Zinc finger, C3HC4 type (RING finger) 134 175 IPR018957 GO:0046872
Mal1g3591 239 PANTHER OS01G0830200 PROTEIN 74 228 - -
Mal1g3591 239 ProSiteProfiles Zinc finger RING-type profile. 134 176 IPR001841 -
Mal1g3591 239 CDD RING-HC_AtRMA_like 132 177 - -
Mal1g3591 239 MobiDBLite consensus disorder prediction 201 226 - -
Mal1g3591 239 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 74 228 IPR045103 GO:0005783|GO:0006511|GO:0061630
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3591 Mal-Chr1 65177282 65178001 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3591 114 218 C3H Transcription Factor Family AT3G58030 58.095 3.56e-38 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3591 K10666 - jre:108985414 176.407
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3591 1 65177282 65178001 Mal1g3591 1 65177282 65178001 ECH