Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3586 ATGAAGAACAAATTGTCTCCCACGTTTCATGATCATTCTTTTGATCTTAAACCAAAAACTAGATACCCATCTTTCTTCTTTCGTGACCACAATCAGAATATCACATGGTTTTTTTCTTATAATAATCATGTTGGAAAACAAAAACACTCATGTGATGTTTGCAACAAAGTTTTTACTTCTAACAAAGCATTGAATGAACATATGAGATGTCACACTCAAGAAGCACCAAAAGGGTATATCAATATTGATGTTGTTGTTATTGCTTCTCAAGCTCTGTTGCATATATCTCGCGGGGGTTATGACGGATCAACTGCCAATATCGATGTGAATCACCGTGACGCTAAAAGGCAAAAACTTTCCAACAATATGGATACTGAGAAGAACAAGGAAACCAACTTGATGTTGAGGTTCAATACTCAAACTTCACAAGATTGCAACGAATCTGTGGGCTCAAATCATTATAATGAAGAGAAGCAGAAGATTAACGAAGGTGAAACCGAAGTAGCGTCAACAGTTGTTAGGAATTTTGATTTGAATGAGCTTCCAAGTGATGATTTTGAAGATGAAACCAATTAA 576 0.3559 MKNKLSPTFHDHSFDLKPKTRYPSFFFRDHNQNITWFFSYNNHVGKQKHSCDVCNKVFTSNKALNEHMRCHTQEAPKGYINIDVVVIASQALLHISRGGYDGSTANIDVNHRDAKRQKLSNNMDTEKNKETNLMLRFNTQTSQDCNESVGSNHYNEEKQKINEGETEVASTVVRNFDLNELPSDDFEDETN* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3586 191 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 43 188 - -
Mal1g3586 191 MobiDBLite consensus disorder prediction 142 164 - -
Mal1g3586 191 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY 45 123 - -
Mal1g3586 191 ProSiteProfiles Zinc finger C2H2 type domain profile. 49 76 IPR013087 -
Mal1g3586 191 Pfam C2H2-type zinc finger 49 73 - -
Mal1g3586 191 SUPERFAMILY beta-beta-alpha zinc fingers 37 76 IPR036236 -
Mal1g3586 191 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 43 188 IPR044653 GO:0003700
Mal1g3586 191 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 45 123 IPR044653 GO:0003700
Mal1g3586 191 SMART c2h2final6 49 71 IPR013087 -
Mal1g3586 191 ProSitePatterns Zinc finger C2H2 type domain signature. 51 71 IPR013087 -
Mal1g3586 191 Gene3D Classic Zinc Finger 39 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3586 Mal-Chr1 64746897 64747472 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Mal1g3586 zf-C2H2_6 1.5e-08 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3586 - K09228 mtr:MTR_1g085590 144.05