Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3555 ATGGCTTTCAAAAACTTCACCTTTATGAAGTTGTATGTTTCCTATCTACTTTCAATCTTGTTCTTTGTATCATTGTGTGTAGCAAATGATGTTCCACCAGAAACCATTTGCGAGTTTACCGTAAACCCTACTTATTGCAAAACCGTTCTTGGTAATCAAAATGGAAACATCTATGATTATGGTCGCATTTCTATTCGAAAATCCTTATCCCAATCCCGTAAGTTCATGAACTTATTGGACTCATATCTTCAAGGTGATTCGTCATTGTCTCAATCCACAATTCGCGCTCTTGAAGATTGCCAATACCTTGCTAACCTAAGTTTTGAATACTTATCAAACACCTATGCCACAACAAATCAATCTAGTAATGTCCTTCCAACTTCTCAAGCGGAAGATTTTGAAACTATCCTCAGTGCCGTTTTGACTAACCAAGAAACGTGTTTGGATGGTCTAAACACTATAGCTTCTGATCAAAGAGTGAAGAATGATGTGTCCGCATTTCTCTCTGATGACATAAAGCTTCATAGTGTCACCCTAGCCTTGTTCTTGAAGGGTTGGATGCCCGCGAATAAAATAAGAACATCATGGCCACAAAAAGGTAGACATTTGAATTTCAAAAATGGTCGTTTACCGTTGAAGATGTCAAATAAAGCACGCGCTATTTATGATTCTGCTAGACGCCATGGGAGAAAACTACTTCAAAATGATGAAGATAGTATTTTGGTAAGTGATATTGTTGTTGTTAGTCAAGATGGAAGTGGAAATTTTACCACCATCAATGATGCAATAGCTGCTGCACCGAATAACACAGTTGCTAGTGATGGATACTTCCTCATTTTTATCACTCAAGGTGTGTATCAAGAGTATGTATCTATTGACAAAAAGAAGAAAAACTTGATGATGATTGGAGAAGGAATCAATCAAACAATTATCACCGGAGATCGCAATGTAGCTGATGGTTTCACAACATTCAATTCAGCCACCTTTGCTGTGGTTGCTCAAGGGTTTGTGGCAGTTAACATAACATTTCGCAACACTGCTGGAGCAGAAAAACACCAAGCAGTTGCAATGAGAAGTGGAGCAGACATGTCCACATTTTATAGTTGCAGCTTTGAAGGGTTTCAAGACACACTATACACACATTCTTTAAGGCAATTCTATAGAGAATGTGATATATATGGAACAGTTGATTTCATATTTGGAAATGGTGCAGTTGTTTTACAAAATTGTAACATCTATCCTCGTCTTCCTCTAAGTGGACAATTCAATCCCATCACAGCTCAAGGTCGAACCGACCCGAATCAAAACACCGGAATTTCAATACAAAATGCTACTATTAAACCAGCAGATGATTTGGCTCCTAAAGTTGGAACTGTTCAAACATACCTAGGGAGACCATGGAAAGAATATTCAAGAACTGTTTATACGCAATCTTTTATGGATAGTTTCATAAACCCTTCTGGTTGGCATGAATGGAATGGTGATTTTGCATTGAGTACATTGTATTATGCAGAATATGATAATAGAGGACCAGGTTCAAGCACTGCAAATAGAGTTACATGGCCTGGTTATCATGTTATTGGTGCTAATGATGCAGCAAATTTCACAGTTTCTAACTTTGTGAGTGGTGATGATTGGATTCCTCAAACGGGTGTCCCCTACATGAGTGGATTGATATAG 1680 0.3804 MAFKNFTFMKLYVSYLLSILFFVSLCVANDVPPETICEFTVNPTYCKTVLGNQNGNIYDYGRISIRKSLSQSRKFMNLLDSYLQGDSSLSQSTIRALEDCQYLANLSFEYLSNTYATTNQSSNVLPTSQAEDFETILSAVLTNQETCLDGLNTIASDQRVKNDVSAFLSDDIKLHSVTLALFLKGWMPANKIRTSWPQKGRHLNFKNGRLPLKMSNKARAIYDSARRHGRKLLQNDEDSILVSDIVVVSQDGSGNFTTINDAIAAAPNNTVASDGYFLIFITQGVYQEYVSIDKKKKNLMMIGEGINQTIITGDRNVADGFTTFNSATFAVVAQGFVAVNITFRNTAGAEKHQAVAMRSGADMSTFYSCSFEGFQDTLYTHSLRQFYRECDIYGTVDFIFGNGAVVLQNCNIYPRLPLSGQFNPITAQGRTDPNQNTGISIQNATIKPADDLAPKVGTVQTYLGRPWKEYSRTVYTQSFMDSFINPSGWHEWNGDFALSTLYYAEYDNRGPGSSTANRVTWPGYHVIGANDAANFTVSNFVSGDDWIPQTGVPYMSGLI* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3555 559 PANTHER PECTINESTERASE 14 557 - -
Mal1g3555 559 ProSitePatterns Pectinesterase signature 2. 392 401 IPR033131 -
Mal1g3555 559 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 14 557 - -
Mal1g3555 559 CDD PMEI-like_3 35 186 - -
Mal1g3555 559 Pfam Plant invertase/pectin methylesterase inhibitor 34 180 IPR006501 GO:0004857
Mal1g3555 559 Gene3D Invertase/pectin methylesterase inhibitor family protein 34 184 IPR035513 -
Mal1g3555 559 SMART PMEI_2 28 181 IPR006501 GO:0004857
Mal1g3555 559 Pfam Pectinesterase 246 544 IPR000070 GO:0030599|GO:0042545
Mal1g3555 559 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 35 182 IPR035513 -
Mal1g3555 559 SUPERFAMILY Pectin lyase-like 242 557 IPR011050 -
Mal1g3555 559 Gene3D - 240 558 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3555 Mal-Chr1 63789268 63791420 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3555 8 559 Carbohydrate Esterase AT1G02810 59.170 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3555 K01051 - gmx:100813051 888.641