Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3550 ATGTTGTGTTGTGGAGGTGCAGAAGAGGATTTCAACAATTTAGCTGCAAACCATTACAGTGCAACAGCTATAGGGGGTAATGCATACGGTGGTGGTCGCGGTGGTGGAGGAGGAGGTGGTGATAGAGGAGAGCCAAGGAGCAATGTTGTGAAGAGTGGTGGTCCTCAGAAAGCATTAGAAATTGAGTTACCCGAAATTAAGTTGAGCGAGTTAAAGCGGTTAACAGAAAACTTTGGTACAAGAGCATTTATTGGAGAAGGTTCCAATGGGAGGGTTTTCCGCGCAAAGTTGAGCACTGGGGAGGATGTAGCAATTAAGAAGCTGGATACTGGTTCGTCACCAGATCCTGAATCTGACTCCGATTTTGAGTCGCAGTTATCAATTGTTTCAAGACTGAAGCATGAACATTTTGTGGGGTTGATGGGATATTGTCTTGAGGCAAATAACAGAGTTTTGGTTTATCAATATGCAAGTCTTGGTTCTTTACATGACACGTTGCACGGAAGAAAAGGAGTTCAAGGGGCTGAACCTGGTATAGTTTTAAATTGGAACCAAAGAGTAAAAGTTGCCTTTGGTGCAGCAAAAGGACTTGAGTTTCTTCATGAGAAAGTTCAACCTTCTATAGTTCATAGAGATGTTAGATCCACTAATGTTTTGCTGTTCAAGGATTATGAGGCTAAGATTGCAGATTTCAACTTGACAAATCAGTCTTCCGACACGGCAGCTCGGCTACATTCAACAAGAGTCTTGGGAACATTTGGCTATCATGCTCCCGAGTATGCTATGACAGGACAAATAACACAAAAAAGTGATGTATACAGTTTTGGTGTTGTGCTTTTAGAACTCTTGACAGGAAGAAAGCCAGTAGACCATACAATGCCTAAAGGACAACAAAGTCTTGTAACTTGGGCAACTCCAAGACTAAGTGAAGACAAAGTGAAACAATGTGTGGATCCTAAACTAAACAATGAATATCCGCCAAAAGCAATCGCTAAGTTGGCAGCAGTTGCAGCACTTTGTGTTCAATATGAAGCTGATTTCAGGCCAAACATGACAATTGTTGTCAAAGCTCTCCAACCACTTCTCAATTCGAAACCGGGTGGACCTGACTCTCATGCTTGA 1122 0.4234 MLCCGGAEEDFNNLAANHYSATAIGGNAYGGGRGGGGGGGDRGEPRSNVVKSGGPQKALEIELPEIKLSELKRLTENFGTRAFIGEGSNGRVFRAKLSTGEDVAIKKLDTGSSPDPESDSDFESQLSIVSRLKHEHFVGLMGYCLEANNRVLVYQYASLGSLHDTLHGRKGVQGAEPGIVLNWNQRVKVAFGAAKGLEFLHEKVQPSIVHRDVRSTNVLLFKDYEAKIADFNLTNQSSDTAARLHSTRVLGTFGYHAPEYAMTGQITQKSDVYSFGVVLLELLTGRKPVDHTMPKGQQSLVTWATPRLSEDKVKQCVDPKLNNEYPPKAIAKLAAVAALCVQYEADFRPNMTIVVKALQPLLNSKPGGPDSHA* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3550 373 ProSiteProfiles Protein kinase domain profile. 78 362 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3550 373 PANTHER OS03G0226300 PROTEIN 1 372 - -
Mal1g3550 373 Gene3D Transferase(Phosphotransferase) domain 1 158 367 - -
Mal1g3550 373 MobiDBLite consensus disorder prediction 34 55 - -
Mal1g3550 373 Pfam Protein tyrosine and serine/threonine kinase 83 358 IPR001245 GO:0004672|GO:0006468
Mal1g3550 373 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Mal1g3550 373 SMART tyrkin_6 78 358 IPR020635 GO:0004713|GO:0006468
Mal1g3550 373 Gene3D Phosphorylase Kinase; domain 1 46 156 - -
Mal1g3550 373 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 1 372 - -
Mal1g3550 373 ProSitePatterns Tyrosine protein kinases specific active-site signature. 208 220 IPR008266 GO:0004672|GO:0006468
Mal1g3550 373 SUPERFAMILY Protein kinase-like (PK-like) 59 358 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3550 Mal-Chr1 63565866 63569290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3550 26 358 Trihelix Transcription Factor Family AT1G70460 42.433 1.18e-83 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Mal1g3550 PK_Tyr_Ser-Thr 3.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3550 - - gmx:100786291 587.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3550 1 63565866 63569290 Mal1g3550 1 63565866 63569290 ECH
Mal3g3658 3 113968944 113971498 Mal1g3550 1 63565866 63569290 PCT