Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3541 ATGGACAAAAAAATCATTGAAAGAGAAACACATGACTTAATGAATGTTGAGTCATTCTCTCAACTTCCATTCATCCGCCCACCTCCCACCAACAAAGAAAAAGGCATCCGCCTCTTCGGCATCGAATTCGGTGGCGGTAGTGCTGCCGCCACCGAAGATGATAACTCCTCTGGCTCTCCGGAACCAACCAACAACATTAACATATTCGAGGTCGACAACAACAACAATAACAACAACAAAGACAACAACAATAACGAAAACAATAGAAGATTTGAATGTCACTACTGTTGTAGAAACTTTCCAACTTCACAAGCTTTAGGTGGTCATCAAAACGCACACAAAAGAGAACGTCAACACGCAAAACGACAACACCTTCAATCAACTATGGTACATGCTACAACTTTCTCTGATCCACATCTTTATCATCATCATCATCATCAACAACAACATCCTCTCTATAGATTCACATCATCATCACCATCATCATTAACATCATCACCTTCTTATCCAACATGGAACACAAACTCAACTGCTGCAAGATTCTATAACCATCCAACTTCTTCTTCTTCTTACTCTCAACAACAACCTATTAATGGTAGTCCTTTGGCTTTTTGGCGTATCCCAAACGGCACAGTTCAGAGTAACCCTAGTTTCAACCAAGAACGCCCTTTGCCTATGCTTGCTTCTGAGGAAAGAGCGAATTTGTGGCACGGTGGACAAGGAGTACCTTCTTCTTCTTCTGCTTCCCATAATCGTTACGTTTATGACTCTAAACGTAACGACCATGTTAGTTTGGATCTTCATCTCTAA 810 0.4111 MDKKIIERETHDLMNVESFSQLPFIRPPPTNKEKGIRLFGIEFGGGSAAATEDDNSSGSPEPTNNINIFEVDNNNNNNNKDNNNNENNRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSTMVHATTFSDPHLYHHHHHQQQHPLYRFTSSSPSSLTSSPSYPTWNTNSTAARFYNHPTSSSSYSQQQPINGSPLAFWRIPNGTVQSNPSFNQERPLPMLASEERANLWHGGQGVPSSSSASHNRYVYDSKRNDHVSLDLHL* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3541 269 MobiDBLite consensus disorder prediction 50 66 - -
Mal1g3541 269 PANTHER ZINC FINGER PROTEIN GIS 1 269 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Mal1g3541 269 ProSitePatterns Zinc finger C2H2 type domain signature. 93 113 IPR013087 -
Mal1g3541 269 MobiDBLite consensus disorder prediction 47 66 - -
Mal1g3541 269 SUPERFAMILY beta-beta-alpha zinc fingers 87 119 IPR036236 -
Mal1g3541 269 ProSiteProfiles Zinc finger C2H2 type domain profile. 91 118 IPR013087 -
Mal1g3541 269 PANTHER ZINC FINGER PROTEIN GIS 1 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3541 Mal-Chr1 62588515 62589324 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3541 1 269 C2H2 Transcription Factor Family AT3G58070 41.034 5.93e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3541 - - gmx:100806594 255.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3541 1 62588515 62589324 Mal1g3541 1 62588515 62589324 ECH