Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3531 ATGGCAGTGTCACATTCTTCACTTCTTCTCCGCTTAGCTTCTTCACGCTTAACTAAACCACTTCATCTCTTGTCATTTTCATTTTCATTCTCATTCTCCACCACCACCTCACCTCCCATCCGAGTCTCTCTCACCGACTCAGTGGGTCGCGCCGTCTTCGCAACTCGCCAAATCCCTACCGGCGATCTCATCCACACCGCCGAACCCGCAGTCTGCCACCCTTCCCTCTCCTCCCCCCATCCCGTCTGCTACTCCTGCCTCGCCACTATCCCTAACCACTCCTCCGCCTCCCTCTTTTGTTCTCACCCTTGCCACCACCGCAGTCAGGAATATTACAATGTTGAGATGAAAGCAAATTGGATGGATTTTGATAACTATTGCCGGAACCGAGGTTTAAAATTTCCCTTTCTGGTAAAGCGGTTGGCTTGCATGATCATATCAGGAGTTGCCAGAAGTGACAGTCTTGACATCCTTCAACCTGCCAATTTGACACCTGAGATGATTTTAGAGATGGAAGAGGGTTTCACCTTGCTAAGGAATGCCTTCACAAAGGCACTTATTGCAGATGAACAAATTGCTTTTTTAACCAAGCAATGGTACATCAGTGTTTTGGCACGAATTCGAATAAATGCATTTCGCATTGAGTTGGCTGGTGGTGGATCATATGAAGATCTTCTTTCTTCAGCATTTGCATCTGTAGAAGCTGAAGCTGCTGTTGGAAATGCTGTCTATATACTTCCTTCCTTCTATAATCATGATTGTGATCCTAATGCACACATTATATGGATCGATAATGCAACGGCAAAATTGAAGGCCCTCCGTGACATCGATGAAGGTGAAGAACTGAGAATCTGCTATATCGATGCTAGTATGGACCGCGATGCTAGGCGAGAACTATTGTTTCGAGGTTTCGGTTTTCAATGCAATTGTAGTAGGTGTTTGCACGGTGATTAG 954 0.4591 MAVSHSSLLLRLASSRLTKPLHLLSFSFSFSFSTTTSPPIRVSLTDSVGRAVFATRQIPTGDLIHTAEPAVCHPSLSSPHPVCYSCLATIPNHSSASLFCSHPCHHRSQEYYNVEMKANWMDFDNYCRNRGLKFPFLVKRLACMIISGVARSDSLDILQPANLTPEMILEMEEGFTLLRNAFTKALIADEQIAFLTKQWYISVLARIRINAFRIELAGGGSYEDLLSSAFASVEAEAAVGNAVYILPSFYNHDCDPNAHIIWIDNATAKLKALRDIDEGEELRICYIDASMDRDARRELLFRGFGFQCNCSRCLHGD* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3531 317 SMART set_7 38 293 IPR001214 GO:0005515
Mal1g3531 317 SUPERFAMILY SET domain 37 311 IPR046341 -
Mal1g3531 317 Pfam SET domain 49 286 IPR001214 GO:0005515
Mal1g3531 317 Gene3D - 127 211 - -
Mal1g3531 317 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD3 46 314 - -
Mal1g3531 317 Gene3D - 82 126 - -
Mal1g3531 317 CDD SET_SMYD 226 313 - -
Mal1g3531 317 Gene3D SET domain 51 313 IPR046341 -
Mal1g3531 317 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SMYD 46 314 - -
Mal1g3531 317 ProSiteProfiles SET domain profile. 38 287 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3531 Mal-Chr1 62010454 62017474 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mal1g3531 SET 2.5e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3531 - - lja:Lj0g3v0252639.2 494.967