Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Mal1g3526 | ATGAGGGGAAGAAGTTACAGTTACAGTCCGTCACCACCAAGGCGTTACGGTGGAAGGAGACGTAGTCCGAGTCCTAGGGGACGGTATGGGGGCCGTTATAGAGGCCGTGATAGGGATTTGCCAACAAGTCTTCTTGTCCGGAACCTGCACAAAGATTGCAGGTCAGAAGATCTGCACGATCCATTTAGTCAGTTTGGTCCTGTCAAGGATGTTTACCTGCCTCGTGATTATTATACTGGGGAGCCAAGGGGCTTTGGGTTTGTTCAATTTGTGGACCCGGCTGATGCTGCAGATGCAAAATATCACATGGATGGTCAAATTCTTCTTGGTCGTGAGTTAACTGTGGTATTTGCTGAAGAAAACAGAAAGAAACCTCAAGAAATGAGAGCAAGAGAACGTGGGAGGTCATATGATTATAGGCGATCTCCACGTCGCCGGTCTCGTTCACCACACTATGCACGAACCTATTCTCGTAGTCCAGACTATTCACCTTCACCAAGACGAAGGCGATATTCCAGGTCAATCTCACCAAGAGACGAAAGGTATGGGAGACGATCATACTCTAGATCGCCTTCCCCTTATAGATCGCCTTATGCATCAAGAAGCCCCAGTCGAAGTAGGAGTTACAGCAGGAGCCGTAGTCCAGGGTACTCTAGGTGA | 660 | 0.4864 | MRGRSYSYSPSPPRRYGGRRRSPSPRGRYGGRYRGRDRDLPTSLLVRNLHKDCRSEDLHDPFSQFGPVKDVYLPRDYYTGEPRGFGFVQFVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARERGRSYDYRRSPRRRSRSPHYARTYSRSPDYSPSPRRRRYSRSISPRDERYGRRSYSRSPSPYRSPYASRSPSRSRSYSRSRSPGYSR* | 220 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Mal1g3526 | 219 | Gene3D | - | 34 | 153 | IPR012677 | - | |
Mal1g3526 | 219 | PANTHER | SERINE/ARGININE RICH SPLICING FACTOR | 1 | 215 | - | - | |
Mal1g3526 | 219 | SUPERFAMILY | RNA-binding domain, RBD | 42 | 148 | IPR035979 | GO:0003676 | |
Mal1g3526 | 219 | MobiDBLite | consensus disorder prediction | 122 | 219 | - | - | |
Mal1g3526 | 219 | MobiDBLite | consensus disorder prediction | 122 | 139 | - | - | |
Mal1g3526 | 219 | PANTHER | SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A | 1 | 215 | - | - | |
Mal1g3526 | 219 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 44 | 113 | IPR000504 | GO:0003723 | |
Mal1g3526 | 219 | SMART | rrm1_1 | 43 | 116 | IPR000504 | GO:0003723 | |
Mal1g3526 | 219 | MobiDBLite | consensus disorder prediction | 163 | 186 | - | - | |
Mal1g3526 | 219 | MobiDBLite | consensus disorder prediction | 1 | 38 | - | - | |
Mal1g3526 | 219 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 42 | 120 | IPR000504 | GO:0003723 | |
Mal1g3526 | 219 | MobiDBLite | consensus disorder prediction | 189 | 219 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Mal1g3526 | Mal-Chr1 | 61976201 | 61978435 | Dispersed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Mal1g3526 | 42 | 161 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 31.667 | 3.15e-09 | 54.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Mal1g3526 | K12900 | - | gmx:100816913 | 203.371 |