Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3526 ATGAGGGGAAGAAGTTACAGTTACAGTCCGTCACCACCAAGGCGTTACGGTGGAAGGAGACGTAGTCCGAGTCCTAGGGGACGGTATGGGGGCCGTTATAGAGGCCGTGATAGGGATTTGCCAACAAGTCTTCTTGTCCGGAACCTGCACAAAGATTGCAGGTCAGAAGATCTGCACGATCCATTTAGTCAGTTTGGTCCTGTCAAGGATGTTTACCTGCCTCGTGATTATTATACTGGGGAGCCAAGGGGCTTTGGGTTTGTTCAATTTGTGGACCCGGCTGATGCTGCAGATGCAAAATATCACATGGATGGTCAAATTCTTCTTGGTCGTGAGTTAACTGTGGTATTTGCTGAAGAAAACAGAAAGAAACCTCAAGAAATGAGAGCAAGAGAACGTGGGAGGTCATATGATTATAGGCGATCTCCACGTCGCCGGTCTCGTTCACCACACTATGCACGAACCTATTCTCGTAGTCCAGACTATTCACCTTCACCAAGACGAAGGCGATATTCCAGGTCAATCTCACCAAGAGACGAAAGGTATGGGAGACGATCATACTCTAGATCGCCTTCCCCTTATAGATCGCCTTATGCATCAAGAAGCCCCAGTCGAAGTAGGAGTTACAGCAGGAGCCGTAGTCCAGGGTACTCTAGGTGA 660 0.4864 MRGRSYSYSPSPPRRYGGRRRSPSPRGRYGGRYRGRDRDLPTSLLVRNLHKDCRSEDLHDPFSQFGPVKDVYLPRDYYTGEPRGFGFVQFVDPADAADAKYHMDGQILLGRELTVVFAEENRKKPQEMRARERGRSYDYRRSPRRRSRSPHYARTYSRSPDYSPSPRRRRYSRSISPRDERYGRRSYSRSPSPYRSPYASRSPSRSRSYSRSRSPGYSR* 220
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3526 219 Gene3D - 34 153 IPR012677 -
Mal1g3526 219 PANTHER SERINE/ARGININE RICH SPLICING FACTOR 1 215 - -
Mal1g3526 219 SUPERFAMILY RNA-binding domain, RBD 42 148 IPR035979 GO:0003676
Mal1g3526 219 MobiDBLite consensus disorder prediction 122 219 - -
Mal1g3526 219 MobiDBLite consensus disorder prediction 122 139 - -
Mal1g3526 219 PANTHER SERINE/ARGININE-RICH SC35-LIKE SPLICING FACTOR SCL30A 1 215 - -
Mal1g3526 219 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 44 113 IPR000504 GO:0003723
Mal1g3526 219 SMART rrm1_1 43 116 IPR000504 GO:0003723
Mal1g3526 219 MobiDBLite consensus disorder prediction 163 186 - -
Mal1g3526 219 MobiDBLite consensus disorder prediction 1 38 - -
Mal1g3526 219 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 42 120 IPR000504 GO:0003723
Mal1g3526 219 MobiDBLite consensus disorder prediction 189 219 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Mal1g3526 Mal-Chr1 61976201 61978435 Dispersed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3526 42 161 Eukaryotic Initiation Factors Gene Family AT3G16380 31.667 3.15e-09 54.3
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3526 K12900 - gmx:100816913 203.371