Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3513 ATGGCTGAAGTCATTCAAGAATCTGTTGCAATCGTTTCAGATCCCTCTCAGATCGAAGTCAAGCTCTTCAACCGCTGGACCTTCGATGATGTTCAGATTAGTGATGTGTCACTTGAGGATTACATTGGAGCAAGAGGATCGAAACATGCAACATATGTTCCACACACTGCTGGTAGATACTCGAAGAAGCGATTCAGGAAGGCTCAGTGTCCTATTGTTGAAAGGCTTACAAACTCTCTCATGATGCATGGGAGGAACAATGGAAAGAAGCTTATGGCTGTTAGAATCATCAAGCATGCTATGGAGATTATTCATTTGCTAACTGACCAGAACCCAATTCAGGTTATCGTTGATGCTGTTGTTAACAGTGGTCCTCGTGAAGATGCAACTCGTATTGGTTCTGCTGGAGTTGTTAGAAGGCAGGCTGTTGATATCTCACCCCTTCGTCGTGTTAATCAAGCCATCTATCTTCTAACTACTGGTGCACGTGAAGCTGCTTTCAGAAACATTAAAACGATTGCTGAATGTCTGGCTGATGAACTTATTAACGCAGCTAAAGGTTCATCCAACAGTTACGCAATCAAGAAAAAAGATGAAATTGAGAGAGTTGCCAAGGCAAATCGTTAA 627 0.4242 MAEVIQESVAIVSDPSQIEVKLFNRWTFDDVQISDVSLEDYIGARGSKHATYVPHTAGRYSKKRFRKAQCPIVERLTNSLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKDEIERVAKANR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3513 208 Pfam Ribosomal protein S7p/S5e 66 208 IPR023798 -
Mal1g3513 208 PANTHER RIBOSOMAL PROTEIN S7 6 208 IPR000235 GO:0006412
Mal1g3513 208 PANTHER 40S RIBOSOMAL PROTEIN S5 6 208 - -
Mal1g3513 208 Gene3D Ribosomal protein S7 domain 4 208 IPR036823 -
Mal1g3513 208 PIRSF RPS7p_RPS7a_RPS5e_RPS7o 2 208 IPR000235 GO:0006412
Mal1g3513 208 ProSitePatterns Ribosomal protein S7 signature. 74 100 IPR020606 GO:0003723|GO:0003735|GO:0006412
Mal1g3513 208 CDD uS7_Eukaryote 21 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
Mal1g3513 208 SUPERFAMILY Ribosomal protein S7 21 208 IPR036823 -
Mal1g3513 208 TIGRFAM uS7_euk_arch: ribosomal protein uS7 19 208 IPR005716 GO:0003735|GO:0006412|GO:0015935
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3513 Mal-Chr1 61491411 61493735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3513 19 208 Cytoplasmic Ribosomal Protein Gene Family AT2G37270 91.053 3.87e-132 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3513 K02989 - gmx:100305898 365.155