Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3478 ATGGGAATATCTAGGACACAATCGGATCAGCTGGCGGAGTCGATGGTGGCGGCTCTAAAGTCGCCACAATCGAGTGATCACTCGACCAACAGTGCAGTGGAAGGGAGCGGAGGACTTTCAAGGAAATCAAGCCGAAGAATAACGGCTGCGTCGCCGGGGCGCGGTGGATCGAAGAATTCACACATTAGGAAAACAAGGAGTGCTCAATTGAAAATTGATTTTGATGAGTTAGGTAGTGGTGCTGCTCTTAGTCGTGCTTCAAGTGCCAGCTTGGGTCTCTCATTTGGTTTTACTGGTTTCACTATGCCTCCTGATCAAATTGCCGATAGACCATTCAGTGATGATGATATGATTCCTGAAGATATTGAAGCTGGAACAAGGAGAAAGACTAAGTTTCAGACAGAACCAACTCTGCCTATATATCTTAAGTTCACTGATGTGACCTACAAGGTAGTGCTGAAAGGCATGACATCAAGTGAGGAGAAGGATATCTTGTATGGGATCAGTGGTTCTGTAAATCCAGGTGAAGTTTTGGCTTTGATGGGTCCCTCAGGAAGTGGAAAGACAACTCTTTTGAATCTCCTTGGAGGAAGAATAAGTCATCCCACAGTTGGTGGTTCTATCACTTACAATGACCAATCATATTCCAAGTCCCTCAAAAGCAGGATAGGATTTGTGACACAAGATGATGTTTTGTTTCCTCACCTAACTGTGAAAGAGACATTAACATACGCAGCTCGGTTAAGACTTCCAAAGACATTAACTAAGGAGCAAAAGGAAAAAAGAGCTTTAGATGTCATCCATGAGCTTGGCTTGGAGAGGTGCCAAGATACTATGATTGGCGGTTCATTTGTTCGCGGAGTATCTGGTGGAGAGAGGAAGAGAGTTTGTATCGGCAATGAGATCATAATCAATCCTTCCATACTGTTTCTTGATGAACCAACATCTGGTTTGGATTCAACAACAGCCTTGAAAATTGTTCAGATGCTGCAAGACATAGCAGAGGCTGGAAAAACAGTAGTGACAACAATTCACCAACCATCAAGTAGACTCTTCCACAAATTTGATAAGTTGATCCTTCTTGGGAAAGGGAGTTTACTTTATTTTGGAAAAGCATCAGAAGCAATGAACTACTTCCAATCTATAGGATGTTCACCACTTATTTCCATGAATCCAGCAGAGTTTTTGCTAGACCTTGCTAATGGAAACATAAATGATGTTTCTGTACCATCAGAGTTGGAGGATAAAGTGCAAATTGGAAATGTATCAGTTGAAATGCGTAATGGAAAACCATCACCAGCAGTAGTCCATGAGTATCTAGTGGAGGCATATGAATCTCGAGTTGCGGAAACAGAGAAGAAAAAAATAATGGTTTCTGTACCTCTAGATGAAGATTTGAAGGGGAAAGTAGTTTCTCCTAAAAGACAATGGGGAGCAAGTTGGGATGAGCAATTTTCCATACTTTTTTGGAGAGGAATCAAGGAAAGGAGGCATGACTATTTTAGCTGGTTGAGAATCACACAAGTTTTATCCACCGCAGTCATCTTAGGATTACTCTGGTGGCAGTCAGATGCTAAAAACCCAAAAGATCTGCAAGATCAGGCAGGACTACTTTTCTTTATTGCCGTGTTTTGGGGATTCTTTCCAGTTTTTACTGCAATATTTACATTTCCTCAAGAGAGAGCCATGTTGAATAAGGAACGTGCAGCCGATATGTACAGATTAAGCGCATACTTCCTTGCTAGAACTACAAGTGACCTTCCATTAGACCTGATATTACCAGTGCTTTTTCTCCTCGTTGTTTACTTCATGGCTGGTCTGAGACTAAGCGCTGCTCCCTTTTTTCTCACCATTCTTACTGTTTTCCTCTGCATCATTGCAGCTCAGGGTCTTGGACTTGCTATCGGTGCCACGCTTATGGACTTGAAAAGAGCAACAACTTTGGCTTCGGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTCGTCCAGAAAGTCCCAATATTCATTTCTTGGATCCGCTACATGTCTTTCAACTACCACACATACAAATTGTTGCTCAAGGTGCAATATGAACATCTTACACCTATCATAAATGGAGTCAAAATTGACAGTGGTTTGACAGAAGTAGCTGCTCTGATTGCGATGGTTTTCGGCTACCGTTTCTTGGCATATCTTTCATTGCGGCGCATGAAACTTCAATAG 2208 0.4221 MGISRTQSDQLAESMVAALKSPQSSDHSTNSAVEGSGGLSRKSSRRITAASPGRGGSKNSHIRKTRSAQLKIDFDELGSGAALSRASSASLGLSFGFTGFTMPPDQIADRPFSDDDMIPEDIEAGTRRKTKFQTEPTLPIYLKFTDVTYKVVLKGMTSSEEKDILYGISGSVNPGEVLALMGPSGSGKTTLLNLLGGRISHPTVGGSITYNDQSYSKSLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTKEQKEKRALDVIHELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSILFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASEAMNYFQSIGCSPLISMNPAEFLLDLANGNINDVSVPSELEDKVQIGNVSVEMRNGKPSPAVVHEYLVEAYESRVAETEKKKIMVSVPLDEDLKGKVVSPKRQWGASWDEQFSILFWRGIKERRHDYFSWLRITQVLSTAVILGLLWWQSDAKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSAAPFFLTILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYMSFNYHTYKLLLKVQYEHLTPIINGVKIDSGLTEVAALIAMVFGYRFLAYLSLRRMKLQ* 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3478 735 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 142 388 IPR003439 GO:0005524
Mal1g3478 735 Pfam ABC transporter 167 316 IPR003439 GO:0005524
Mal1g3478 735 MobiDBLite consensus disorder prediction 1 47 - -
Mal1g3478 735 CDD ABCG_EPDR 139 370 - -
Mal1g3478 735 Gene3D - 141 382 IPR027417 -
Mal1g3478 735 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 380 IPR027417 -
Mal1g3478 735 ProSitePatterns ABC transporters family signature. 288 302 IPR017871 GO:0005524
Mal1g3478 735 MobiDBLite consensus disorder prediction 1 64 - -
Mal1g3478 735 SMART AAA_5 174 365 IPR003593 -
Mal1g3478 735 Pfam ABC-2 type transporter 483 692 IPR013525 GO:0016020|GO:0140359
Mal1g3478 735 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 8 732 - -
Mal1g3478 735 PANTHER PIGMENT PERMEASE, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 8 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3478 Mal-Chr1 59714628 59759320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3478 140 402 Calmodulin-binding Proteins AT2G36910 29.368 9.04e-16 80.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3478 K05681 - gmx:100798801 1233.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3478 1 59714628 59759320 Mal1g3478 1 59714628 59759320 ECH
Mal3g4512 3 124950290 124958181 Mal1g3478 1 59714628 59759320 PCT