Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3464 ATGGAATTGAAATTAAAAGAGCAATTAGAAGCTTTCAAGAGAGAGTTATTAGGAGGTTTCAACATTGTTTTAACTCAGATACACCAATGTTACCCTAAATTAGTTATTCCAACCTTGTTTAGCATTCCAAAGACAAATGATGTGCAAGCTGATCCACATTCTTCTGCTGAGATCAAAGAAGAAATTGCTCATAAAAAGCGACGTGAGAAGGAAATTCAACTTGTGGACAATCTCGCTAATGAGAAGCCGAAGAAACACACAAAGAAGCCTATGGGCCTATGTCCAAGGGGCTCAAAGCATGAAGTCCTTGAAGAGCAACAAGAGAAACCACAAATTTTAGGAAATAAGCGTAAGGTCTCATGGACAAGTGGCTACATGCCTGAAGTCCTTGAAGAGCAACAAGAGAAACACACTAAGAGCAAGTCAAAAGAAAACCAGGCCAAAAAAATCAAAGTTGAGAAGGATGCTAATATGCTTGAGAATCCGCCGACTTCCTTTTTTCTCTTATGGGATAAATTTGGCGAAAATTCTGATGTTAATAAAATGGCTGTTAAAGCATGGAAGTCCATGAGTAATGAAGATAAACAACATTATTTGGATAAAGCAGCTAAGCGCAAGGCAAAACATGAGAAACTTATGAAGAAAGGGTAA 651 0.3779 MELKLKEQLEAFKRELLGGFNIVLTQIHQCYPKLVIPTLFSIPKTNDVQADPHSSAEIKEEIAHKKRREKEIQLVDNLANEKPKKHTKKPMGLCPRGSKHEVLEEQQEKPQILGNKRKVSWTSGYMPEVLEEQQEKHTKSKSKENQAKKIKVEKDANMLENPPTSFFLLWDKFGENSDVNKMAVKAWKSMSNEDKQHYLDKAAKRKAKHEKLMKKG* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3464 216 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 160 216 IPR009071 -
Mal1g3464 216 SUPERFAMILY HMG-box 146 214 IPR036910 -
Mal1g3464 216 CDD HMG-box 176 214 - -
Mal1g3464 216 Pfam HMG (high mobility group) box 176 214 IPR009071 -
Mal1g3464 216 Gene3D High mobility group box domain 121 215 IPR036910 -
Mal1g3464 216 PANTHER HIGH MOBILITY GROUP B PROTEIN 12-RELATED 123 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3464 Mal-Chr1 59379078 59383279 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Mal1g3464 HMG_box 2.6e-06 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3464 K25507 - mtr:MTR_8g107350 308.145