Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3448 ATGGGAAACAACTGTGTTGGATCGAGAACCTTTTTTTCGAAGGATGAAACATCATCACGCTCAACTCTTCCAAGTCCATCTTGCTGGTCACGTGGTGGAACCAGGAAAGATATTTCTCATGCACACAAAACAAGTCCAACAAAACCAAAAGAATCTGTTCAAAACAAGCCTCCAACGGTAGTGAAAATCGAAAAGGAGGATGTAAAGCCACCACCACAACAACAACAACAACAACATCATCGTCAACAACAACAACAACAACAAAAACCACAAACTAATGAAGCTGTTGTTGCTACACCTGCAAAACCAAAGAGACCTCACAATGTGAAGAGGCTAGCAAGTGCAGGGCTAAAAGCAGATTCAGTTTTACAGCGAAAAACGGTTAGTCTTAAGGAGTTTTATACTTTAGGACCAAAGCTAGGACAAGGGCAATTTGGAACTACATTCCTTTGTGTGGAGAAAGCTACTGGGAAAGAGTATGCATGTAAGTCAATCTTGAAAAGGAAGTTGTTGACTGAAGAGGATGTTGAAGATGTGAGGAGGGAGATTCAGATTATGCATCACTTGGCTGGAAGTTCCAATGTGATTTCGATTAAGGAAGCTTCTGAGGATGCTGTTGCTGTTCATGTTGTTATGGAGTTGTGTGCAGGTGGTGAACTTTTTGATAGGATTGTGGAAAGAGGACATTATACAGAGAGAAAGGCGGCGAAACTTGCGAGGACTATTGTTGGTGTTATTCAGTCATGTCATTCTCTTGGTGTAATGCATCGCGATCTTAAGCCGGAGAATTTTCTTTTTGTTAATCAGCAGGAGGACTCTCCCCTTAAGGCAATTGATTTTGGATTGTCTTGTTTTTTCAAACCAGGTGACATTTTTAACGATGTCGTAGGAAGTCCATATTATGTTGCGCCTGAAGTTTTACGCAAGCGGTATGGTCCAGAAGCAGATGTGTGGAGTGCCGGTGTCATCTTGTACATTCTCTTATGTGGTGTGCCTCCATTTTGGGGTGAGTCGGAGCAAGATATATTTGATGCCATTTTGCATAGTGATCTTGATTTCTCATCCGATCCATGGCCAAGTATCTCTGAAAGTGCAAAAGACTTGGTTAAGAAGATGCTTGTCAGAGACCCTAGTAAACGGTTAACAGCTTTTGACGTTCTTCGTCACCCATGGATCCAGATTGATGGAGCAGCCCCAGACAAGCCGCTTGATTCTGCAGTTTTGAGTCGCATGAAGCAGTTTACTGCAATGAACAAGCTCAAGAAAATGGCTCTTAGAGTTATTGCAGAGAATCTATCTGAAGAAGAAATTGCTGGATTGAAAGAAATGTTTAAGATGATCGACACAGACAATAGTGGTCACATTAGTTTTGAAGAACTCAAGGTTGGACTGAAAAGATTTGGTGCCAATCTCAAAGAATCTGAAATTTACGATCTAATGCAAGCTGCAGATGTTGATAACAGTGGCACGATCGACTATGGAGAATTCATAGCTGCAACATTACATTTAAACAAAGTTGATAGGGAAGATCATTTAGTTGCAGCTTTCTCATATTTTGATAAAGATGGAAGTGGATACATCACAAAAGATGAGCTTCAAAAAGCTTGTGAAGAATTTGGCCTAGGCGATGTCCCCTTGGAGGAAATGATCCGAGAAGTTGATCAGAATAATGATGGAAGAATAGACTACAATGAATTTGTGGCTATGATGCATAGAGGGAATGCAGAAATTAAGAGGGGTCGAAAGGGTAGCCGTAGTTTTAGCATTGGTTTTAGGGAGGCACTACCAGTATGTTAA 1797 0.4107 MGNNCVGSRTFFSKDETSSRSTLPSPSCWSRGGTRKDISHAHKTSPTKPKESVQNKPPTVVKIEKEDVKPPPQQQQQQHHRQQQQQQQKPQTNEAVVATPAKPKRPHNVKRLASAGLKADSVLQRKTVSLKEFYTLGPKLGQGQFGTTFLCVEKATGKEYACKSILKRKLLTEEDVEDVRREIQIMHHLAGSSNVISIKEASEDAVAVHVVMELCAGGELFDRIVERGHYTERKAAKLARTIVGVIQSCHSLGVMHRDLKPENFLFVNQQEDSPLKAIDFGLSCFFKPGDIFNDVVGSPYYVAPEVLRKRYGPEADVWSAGVILYILLCGVPPFWGESEQDIFDAILHSDLDFSSDPWPSISESAKDLVKKMLVRDPSKRLTAFDVLRHPWIQIDGAAPDKPLDSAVLSRMKQFTAMNKLKKMALRVIAENLSEEEIAGLKEMFKMIDTDNSGHISFEELKVGLKRFGANLKESEIYDLMQAADVDNSGTIDYGEFIAATLHLNKVDREDHLVAAFSYFDKDGSGYITKDELQKACEEFGLGDVPLEEMIREVDQNNDGRIDYNEFVAMMHRGNAEIKRGRKGSRSFSIGFREALPVC* 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3448 598 PANTHER SERINE/THREONINE-PROTEIN KINASE 69 583 - -
Mal1g3448 598 MobiDBLite consensus disorder prediction 1 107 - -
Mal1g3448 598 ProSitePatterns EF-hand calcium-binding domain. 554 566 IPR018247 -
Mal1g3448 598 ProSitePatterns EF-hand calcium-binding domain. 520 532 IPR018247 -
Mal1g3448 598 ProSiteProfiles EF-hand calcium-binding domain profile. 435 470 IPR002048 GO:0005509
Mal1g3448 598 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Mal1g3448 598 PANTHER CALCIUM-DEPENDENT KINASE 69 583 - -
Mal1g3448 598 ProSitePatterns Protein kinases ATP-binding region signature. 140 167 IPR017441 GO:0005524
Mal1g3448 598 Gene3D Transferase(Phosphotransferase) domain 1 220 397 - -
Mal1g3448 598 SUPERFAMILY EF-hand 431 574 IPR011992 -
Mal1g3448 598 MobiDBLite consensus disorder prediction 70 95 - -
Mal1g3448 598 CDD EFh 440 499 IPR002048 GO:0005509
Mal1g3448 598 ProSiteProfiles EF-hand calcium-binding domain profile. 546 576 IPR002048 GO:0005509
Mal1g3448 598 Gene3D - 399 575 - -
Mal1g3448 598 ProSiteProfiles EF-hand calcium-binding domain profile. 507 542 IPR002048 GO:0005509
Mal1g3448 598 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Mal1g3448 598 Pfam Protein kinase domain 134 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3448 598 ProSiteProfiles Protein kinase domain profile. 134 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3448 598 SMART efh_1 511 539 IPR002048 GO:0005509
Mal1g3448 598 SMART efh_1 545 573 IPR002048 GO:0005509
Mal1g3448 598 SMART efh_1 475 503 IPR002048 GO:0005509
Mal1g3448 598 SMART efh_1 439 467 IPR002048 GO:0005509
Mal1g3448 598 Gene3D Phosphorylase Kinase; domain 1 137 219 - -
Mal1g3448 598 CDD EFh 511 571 IPR002048 GO:0005509
Mal1g3448 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Mal1g3448 598 SUPERFAMILY Protein kinase-like (PK-like) 133 393 IPR011009 -
Mal1g3448 598 SMART serkin_6 134 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mal1g3448 598 MobiDBLite consensus disorder prediction 35 49 - -
Mal1g3448 598 CDD STKc_CAMK 133 391 - -
Mal1g3448 598 ProSitePatterns EF-hand calcium-binding domain. 448 460 IPR018247 -
Mal1g3448 598 Pfam EF-hand domain pair 511 570 IPR002048 GO:0005509
Mal1g3448 598 Pfam EF-hand domain pair 440 500 IPR002048 GO:0005509
Mal1g3448 598 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3448 Mal-Chr1 59099740 59103581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3448 49 589 EF-hand Containing Proteins AT3G10660 73.394 0.0 829
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mal1g3448 Pkinase 5.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3448 K13412 - gmx:100783079 968.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3448 1 59099740 59103581 Mal3g4499 3 124832510 124836386 PCT