Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3381 ATGGCAACGTACTTTCATAATAATAATTCAGAAATCCAAGGTGGTTCTAGTGATGGTCTTCAAACACTCATTTTCATGAACCCATCAGGCTACATCAATTACTCCGACGCGCCGCAGCCGCCGCCGCATGCTGGAAACCTTGTTTTTCTCAATTCAGCCGCCAATCTCGCCGGCAACACTTCCCTCCACCACCAACAACAACAGAATTTATCTCACGCGCCACCACAGTTTGTCGGCGTTCCGCTCTCGGCAGAACAATCAGTACATGCCCATCACGACGTCTCTGCTTTGCATGGCTTCCCACCGCGCATGCAGTACAACATGTGGAACACCGCCGACCCAAATTCGGCGGCGCGTGAATCCACACGCGCTACTCAGGGGCTGTCATTAAGCTTACATGCACAAGGGTCGGGTGAGGACGCGCGTGTTTCCGGTGGTGGTGGTGGTGGGTCGTGTTCCTCTGCTTCGAACGGTGGTGTTTCGGGGATTCAGAGTGTGTTGTTGAGTTCTAAGTATTTGAAGGCTACACAAGAATTACTTGATGAGGTTGTTAATGTTAATGGTGGGATTAAGGTTGAAAATGTTAAGAAGAGTTTTGAGAAAAATAAGGTTGTTGGAGAATCTTCAACTGCGGTTAGTGGAGATGGTGGTTCTGTTGGTGGTGGTGATGGAAATGGGAAACGTAGCTCTGAATTATCAACTACAGAGAGACAAGAAATTCAGATGAAGAAAGCTAAGTTAATTAACATGCTTGATGAGGTGGAACAAAGGTACAGACAATATCACAACCAAATGCTGATGGTGATATCCTCATTTGAGCAAGTTGCAGGGATAGGTTCCGCAAAAACCTACACTGCACTTGCACTACAAACAATATCCAAGCAATTTCGGTGTTTAAAAGACGCAATTACCGGTCAAATTAGAGCTGCAAATAAGAGCTTAGGCGAAGATGATAGCTTTGGTGGCAAAATTGAAGGGTCAAGGCTCAAATATGTTGATCATCATTTAAGGCAACAAAGAGCTATTCAACAATTGGGAATGATTCATCATAATGCTTGGAGACCTCAAAGAGGATTGCCCGAAAGATCTGTTTCTGTTCTTCGTGCCTGGCTTTTCGAACATTTTCTCCATCCTTATCCCAAGGATTCAGACAAACACATGCTTGCAAAACAAACAGGACTTACTAGGAGCCAGGTTTCAAATTGGTTCATAAATGCTCGAGTTCGACTTTGGAAACCAATGGTGGAGGAAATGTACATGGAAGAGATGAAGGATCAAGAGCTGAATGGTTCTGAGGACAACAAATCAAGCAAAAATACCGATGAAGATCCTTCGATCAAAACAACAACTCCACAAGAAAGAGTTCCAACCTCGGAAACAGAATCCAAAAGTTTCAATTCCAAACAAGACATTCCTATGGTTTCGGTTTCAACATCATCAACTTCACCTATTGGTGTGAATGTTAGAAACCAATCATCAGGATTCAGCTTCACAGAACTTGATGGAATAACACAAGCAAGTCCGAAGCGAACAAGGAACCATGAAATTCTTCAATCACCAAATCATGTGAAATCCAATGAGACAACAACAAATAATGAACAAATTTCAATGAAATTTGGTGATGAAAGACAAAGTAGAGATGGTTATTGTTTCATGGGAAACCAAACTAATTTCATTGCTGGTTTTGGTCAATACCCTATGGAGGAAATTGGAAGATTTGATGCAGAACAATTTGCACCGCGGTTTTCAGGTAATAATAATGGTGTTTCACTCACTCTTGGTTTGCCTCATTGTGAGACATTATCAGGAACACATCAAAGTTTTATGCCAAACCAAAACATTCAACTAGGAAGAAGATTGGACATTAGTGAAACAAATGAGTTTGGTGACTCTTCAGCTGCATTTGAGAGTATCAACATGCAGAATCCAAAGAGGTTTGCTGCGCAATTGTTGCCGGATTTTGTGGCATAA 1971 0.4242 MATYFHNNNSEIQGGSSDGLQTLIFMNPSGYINYSDAPQPPPHAGNLVFLNSAANLAGNTSLHHQQQQNLSHAPPQFVGVPLSAEQSVHAHHDVSALHGFPPRMQYNMWNTADPNSAARESTRATQGLSLSLHAQGSGEDARVSGGGGGGSCSSASNGGVSGIQSVLLSSKYLKATQELLDEVVNVNGGIKVENVKKSFEKNKVVGESSTAVSGDGGSVGGGDGNGKRSSELSTTERQEIQMKKAKLINMLDEVEQRYRQYHNQMLMVISSFEQVAGIGSAKTYTALALQTISKQFRCLKDAITGQIRAANKSLGEDDSFGGKIEGSRLKYVDHHLRQQRAIQQLGMIHHNAWRPQRGLPERSVSVLRAWLFEHFLHPYPKDSDKHMLAKQTGLTRSQVSNWFINARVRLWKPMVEEMYMEEMKDQELNGSEDNKSSKNTDEDPSIKTTTPQERVPTSETESKSFNSKQDIPMVSVSTSSTSPIGVNVRNQSSGFSFTELDGITQASPKRTRNHEILQSPNHVKSNETTTNNEQISMKFGDERQSRDGYCFMGNQTNFIAGFGQYPMEEIGRFDAEQFAPRFSGNNNGVSLTLGLPHCETLSGTHQSFMPNQNIQLGRRLDISETNEFGDSSAAFESINMQNPKRFAAQLLPDFVA* 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3381 656 Gene3D - 356 433 - -
Mal1g3381 656 MobiDBLite consensus disorder prediction 426 442 - -
Mal1g3381 656 Coils Coil 237 264 - -
Mal1g3381 656 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 7 614 - -
Mal1g3381 656 SUPERFAMILY Homeodomain-like 354 420 IPR009057 -
Mal1g3381 656 MobiDBLite consensus disorder prediction 426 487 - -
Mal1g3381 656 CDD homeodomain 353 413 IPR001356 GO:0003677
Mal1g3381 656 MobiDBLite consensus disorder prediction 443 487 - -
Mal1g3381 656 SMART prehox3 161 305 IPR006563 -
Mal1g3381 656 Pfam Homeobox KN domain 370 409 IPR008422 GO:0003677|GO:0006355
Mal1g3381 656 MobiDBLite consensus disorder prediction 134 155 - -
Mal1g3381 656 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 5 7 614 - -
Mal1g3381 656 Pfam Associated with HOX 166 304 IPR006563 -
Mal1g3381 656 SMART HOX_1 353 417 IPR001356 GO:0003677
Mal1g3381 656 ProSiteProfiles 'Homeobox' domain profile. 350 413 IPR001356 GO:0003677
Mal1g3381 656 MobiDBLite consensus disorder prediction 207 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3381 Mal-Chr1 56817669 56821277 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3381 1 656 Homeobox Transcription Factor Family AT2G35940 50.337 0.0 560
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mal1g3381 POX 3.4e-49 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3381 - - gmx:100810851 932.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal3g4470 3 124517754 124522716 Mal1g3381 1 56817669 56821277 PCT