Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3347 ATGCAGTCAGAAGTTGAAAACCTTTCTCTGGAAGAGCAGAGACTAGATGATCAGATAAGGGAAATGCAAGAAAGATTGAGAAGTTTGAGTGAAGATGAAAACAACCAGAAGTTCCTTTTTGTGACCGAGGAAGATATTAAGGGCCTACCTTGCTTCCAGAATGAAACTTTGATAGCAATCAAAGCTCCGCATGGAACCACCTTGGAAGTTCCTGATCCTGAGGAAGCCGTTGAAGAACTACAGCGGAGATATAGAATCATTTTAAGGAGCACAATGGGTCCAATTGATGTCTACCTTATCAGTCAGTTTGAAGAGAAATTTGAAGAGATTAATGGTGCTGAGCCCCCCACGATCTTCCCTCTTGCTTCAAGTTCAGGGTCTAATGAGCAACAAGTGACAGAATTGGTTCCCGCTGAATGCAGTGGAAAAGAACTTGAACCTCAAGCTCTGCTCTCTTCTCAGACATACTCTGATCTAAATGCTTCGCAGGAGTTTGCTGGGGGCATGATGAAGATTGTCCCTTCAGATGCTGATAATGATGCTGATTATTGGCTTCTGTCAGATGCTGAAGTTAGCATAACAGATATGTGGAGAACAGACTCTAATGTTGATTGGAGTGCAGTGGACATGCTTCATCCTGACTTTGAAATGCTCGCGAGGCCACAAACTCCATCGCCTGGACTTGTTGAAGCACCATCGACTGTAGCTAACCCAAATCAGAGGTGA 726 0.4394 MQSEVENLSLEEQRLDDQIREMQERLRSLSEDENNQKFLFVTEEDIKGLPCFQNETLIAIKAPHGTTLEVPDPEEAVEELQRRYRIILRSTMGPIDVYLISQFEEKFEEINGAEPPTIFPLASSSGSNEQQVTELVPAECSGKELEPQALLSSQTYSDLNASQEFAGGMMKIVPSDADNDADYWLLSDAEVSITDMWRTDSNVDWSAVDMLHPDFEMLARPQTPSPGLVEAPSTVANPNQR* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3347 241 CDD E2F_DD 1 102 IPR032198 GO:0046983
Mal1g3347 241 PANTHER TRANSCRIPTION FACTOR E2F 1 226 IPR015633 GO:0000978|GO:0006357
Mal1g3347 241 SUPERFAMILY E2F-DP heterodimerization region 2 102 IPR037241 -
Mal1g3347 241 Coils Coil 5 32 - -
Mal1g3347 241 MobiDBLite consensus disorder prediction 221 241 - -
Mal1g3347 241 Pfam E2F transcription factor CC-MB domain 1 101 IPR032198 GO:0046983
Mal1g3347 241 MobiDBLite consensus disorder prediction 227 241 - -
Mal1g3347 241 Gene3D - 1 102 - -
Mal1g3347 241 PANTHER TRANSCRIPTION FACTOR E2FB 1 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3347 Mal-Chr1 55497562 55499293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mal1g3347 1 235 E2F-DP Transcription Factor Family AT2G36010 57.085 4.69e-87 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3347 K06620 - gmx:100811762 400.208