Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3338 ATGTCTAGTTCAAAAAAGAAACTAACCTTAAACACTGTGTCCATAAATCTTGGTTGTGGAACATGTAGAAGACCAAAACTTGGTTTCCTTTTCAACCTAAAATCAAAACACAAAAACCCCACTTATAACCAAAACCACAAAAAACTTCACCTTCATAAAAATTCTTCATCTTCAAGTTCAACCATTTGGAAACAGAAAGACAGAGACATAATTGAAACTTCATCTAGCACAGCCAACACAACACCAACAACAAACACATCATTCGACTCAGAGAAATCTTCATTGAAAGGTTTTGGAAGAGTTGGAAATGAAGGTGTAGCTGTGGAGAAAGATTCTGATGACCCTTATCTTGATTTCAGACATTCAATGTTACAAATGATATTGGAGAATGAGATATATTCTAAGGATGATCTTAGAGAACTTTTGAATTGTTTTCTTCAGCTGAATTCGAAGGAACATCATGGGATTATTATTAGAGCTTTTACTGAGATTTGGAATGGAGTTTTCTCTGTTAAGTCTGGTTTTTCACACCTTAACCGTAACTCACGTGACTTCTAA 558 0.3459 MSSSKKKLTLNTVSINLGCGTCRRPKLGFLFNLKSKHKNPTYNQNHKKLHLHKNSSSSSSTIWKQKDRDIIETSSSTANTTPTTNTSFDSEKSSLKGFGRVGNEGVAVEKDSDDPYLDFRHSMLQMILENEIYSKDDLRELLNCFLQLNSKEHHGIIIRAFTEIWNGVFSVKSGFSHLNRNSRDF* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3338 185 ProSiteProfiles OVATE domain profile. 108 167 IPR006458 -
Mal1g3338 185 MobiDBLite consensus disorder prediction 73 96 - -
Mal1g3338 185 MobiDBLite consensus disorder prediction 73 93 - -
Mal1g3338 185 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 106 166 IPR006458 -
Mal1g3338 185 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 173 IPR038933 GO:0045892
Mal1g3338 185 PANTHER TRANSCRIPTION REPRESSOR OFP6 1 173 - -
Mal1g3338 185 Pfam Transcriptional repressor, ovate 112 168 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3338 Mal-Chr1 55341112 55341669 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mal1g3338 Ovate 2e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3338 - - pvu:PHAVU_007G269800g 210.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3338 1 55341112 55341669 Mal1g3338 1 55341112 55341669 ECH