Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mal1g3336 ATGGTGAAAAGAATGAAGTTCCTTTCTCTTTTCAAAAACAAAGATGGAAGATCCTTTTCATCATCATCATGGGCTTGGCCATCTTGCAATCAACCAAAAACACTTTCATTCAGAGTCATTAATCCAACCTTTGTAGGCTCCACCAACAAAGAGGTTATAGAAACATCTGAATCTTTACTATTAACTGAATTTTCTTCTGAGGATTTCAGAGGTAATAATGGTATTGAGACAATGATTCGCGATTTATGTTCTGATCGACTTTTTTTCGAACCTTTGGAAACAAGCTCGATATTAAAGACCAAAGAAATAATTAATACTATGTCATCGAATAGATTAAGTAGCAGCAATAACGACAACTTATTATTACCATTTGAGAACACTATTGAATTTCCAATGGATTCACGAAATCCATGTGAAGATTTCAAAGAATCTATTGTGGAAATGGTGGAGGCTCATGAAGTTAACAATTGGGAAACTCTTGAAAAACTTTTGAGTTGGTATTTAGAAGTCAATGAGAAAAGCAATTATGGATTTATTATTGATGCTTTTTTTGATTTATTTGTTGGATTTAATCATAATTCACCAAATTCTTCTCCTTTATCGATTCATAGTTGTTCTTCTCTTGATTCTTTGTGGAGCACACCTTGTGTTTCATCTTATAGTTCACCTTTGTAA 675 0.3259 MVKRMKFLSLFKNKDGRSFSSSSWAWPSCNQPKTLSFRVINPTFVGSTNKEVIETSESLLLTEFSSEDFRGNNGIETMIRDLCSDRLFFEPLETSSILKTKEIINTMSSNRLSSSNNDNLLLPFENTIEFPMDSRNPCEDFKESIVEMVEAHEVNNWETLEKLLSWYLEVNEKSNYGFIIDAFFDLFVGFNHNSPNSSPLSIHSCSSLDSLWSTPCVSSYSSPL* 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mal1g3336 224 Pfam Transcriptional repressor, ovate 134 188 IPR006458 -
Mal1g3336 224 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 131 189 IPR006458 -
Mal1g3336 224 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 5 223 IPR038933 GO:0045892
Mal1g3336 224 PANTHER OVATE TRANSCRIPTIONAL REPRESSOR 5 223 - -
Mal1g3336 224 ProSiteProfiles OVATE domain profile. 130 189 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mal1g3336 Mal-Chr1 55301714 55302388 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Mal1g3336 Ovate 9.7e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mal1g3336 - - mtr:MTR_1g058000 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mal1g3336 1 55301714 55302388 Mal1g0291 1 3214226 3214966 ECH
Mal1g3336 1 55301714 55302388 Mal1g3336 1 55301714 55302388 ECH
Mal3g4432 3 123947226 123948077 Mal1g3336 1 55301714 55302388 PCT